Gene Mvan_5223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5223 
Symbol 
ID4644324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5593247 
End bp5593840 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content72% 
IMG OID639808698 
ProductTetR family transcriptional regulator 
Protein accessionYP_956000 
Protein GI120406171 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.325156 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGGAAG CTGGATCGGC GGCCCGCCGC GGCCGCCCAC GCAGCGAGGC CGCCCGCAGC 
GCCGTGCTGA CCGCCGCCGC CGAACTGGCT CTCGAAGGTG GACCCGCCGC CGCGACGGTC
GAGGCGATCG CCAAACGCGC GCACGTCAGC CGCACCACGA TCTACAAGTG GTGGCCGTCG
GCGGCCTCGA TCGTGCTGGA AGGTCTGCTC GACGCGGTCC GCGCGTCCAT CACGCGTCCG
TCGGGCAGTA CCTCGGTGCA GGCTCTCGTG CACCATGTCA GCTCGCTGAA CGCGATCCTG
GCCGATCCCG CGGTGGGGCC ACTGCTGCGC AATGTGATCG CCGCGTCGAC GTCGGATCCG
GCGATCGAGC GGGCCGTCCT CGACCAGTGG ATCGCCCCGC GCCGGGCAGC GGTGGCCGTG
ACATTGCGCG AGGCCGTCGA TCGCGGGGAA CTACCGGGCG ACGTCGACAT CGAGGTGGCC
GTCGACGCGT TGGTGTCCCC GCCGTACTAC CGGTTGGTGC TGGGGATGCC GCCATTGGCC
GCCGAGGCGG TGGATCGGCT CGTCGAGACC GTGTGGAGCG GCTGCCGGCA CTAG
 
Protein sequence
MVEAGSAARR GRPRSEAARS AVLTAAAELA LEGGPAAATV EAIAKRAHVS RTTIYKWWPS 
AASIVLEGLL DAVRASITRP SGSTSVQALV HHVSSLNAIL ADPAVGPLLR NVIAASTSDP
AIERAVLDQW IAPRRAAVAV TLREAVDRGE LPGDVDIEVA VDALVSPPYY RLVLGMPPLA
AEAVDRLVET VWSGCRH