| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5223 |
|---|
| Symbol | |
|---|
| ID | 4644324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 5593247 |
|---|
| End bp | 5593840 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639808698 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_956000 |
|---|
| Protein GI | 120406171 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.325156 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTGGAAG CTGGATCGGC GGCCCGCCGC GGCCGCCCAC GCAGCGAGGC CGCCCGCAGC
GCCGTGCTGA CCGCCGCCGC CGAACTGGCT CTCGAAGGTG GACCCGCCGC CGCGACGGTC
GAGGCGATCG CCAAACGCGC GCACGTCAGC CGCACCACGA TCTACAAGTG GTGGCCGTCG
GCGGCCTCGA TCGTGCTGGA AGGTCTGCTC GACGCGGTCC GCGCGTCCAT CACGCGTCCG
TCGGGCAGTA CCTCGGTGCA GGCTCTCGTG CACCATGTCA GCTCGCTGAA CGCGATCCTG
GCCGATCCCG CGGTGGGGCC ACTGCTGCGC AATGTGATCG CCGCGTCGAC GTCGGATCCG
GCGATCGAGC GGGCCGTCCT CGACCAGTGG ATCGCCCCGC GCCGGGCAGC GGTGGCCGTG
ACATTGCGCG AGGCCGTCGA TCGCGGGGAA CTACCGGGCG ACGTCGACAT CGAGGTGGCC
GTCGACGCGT TGGTGTCCCC GCCGTACTAC CGGTTGGTGC TGGGGATGCC GCCATTGGCC
GCCGAGGCGG TGGATCGGCT CGTCGAGACC GTGTGGAGCG GCTGCCGGCA CTAG
|
|---|
| Protein sequence | MVEAGSAARR GRPRSEAARS AVLTAAAELA LEGGPAAATV EAIAKRAHVS RTTIYKWWPS
AASIVLEGLL DAVRASITRP SGSTSVQALV HHVSSLNAIL ADPAVGPLLR NVIAASTSDP
AIERAVLDQW IAPRRAAVAV TLREAVDRGE LPGDVDIEVA VDALVSPPYY RLVLGMPPLA
AEAVDRLVET VWSGCRH
|
|---|
| |