Gene Mvan_5204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5204 
Symbol 
ID4644305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5570230 
End bp5570943 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content67% 
IMG OID639808679 
Producthypothetical protein 
Protein accessionYP_955981 
Protein GI120406152 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.217332 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTGG ACACGTTCGT CAAAACCTTC CGTCGGCCGT TCCAGTTTCG GGAGTTCCTC 
GAGCAGACCT GGATGATCGC GCGGGTCTCT CTGGTACCGA CGCTGCTGGT CGCCATCCCG
TTCACGGTGC TGGTGGCGTT CACGCTGAAC ATCCTGCTGC GGGAGATCGG CGCCGCGGAC
CTGTCGGGCG CCGGAACAGC GTTCGGCACC ATCACCCAGT TGGGCCCGGT GGTGACGGTG
CTCGTCGTCG CCGGCGCCGG CGCGACCGCG ATCTGCGCCG ACCTCGGCGC CCGCACCATC
CGCGAGGAGA TCGACGCGAT GCGGGTGCTG GGCATCGACC CGATCCAGCG CCTCGTCGTG
CCCCGTGTGC TGGCCTCGAC GTTCGTCGCA CTGCTGCTCA ACGGGCTGGT CTGCCTGATC
GGCCTGTCCG GCGGCTATGT GTTCTCAGTG TTCCTCCAGG GCGTCAACCC CGGGGCGTTC
ATCAACGGGC TCACCGTGCT GACCGGCCTC GGCGAGCTCG TCCTCGCCGA GATCAAGGCC
CTGCTGTTCG GTGTGGTCGC CGGACTGGTC GGCTGTTACC GCGGCCTGAC CGTCAAGGGT
GGCCCCAAGG GCGTCGGCAA CGCAGTCAAC GAGACCGTCG TCTACGCGTT CATCTGTCTG
TTCGTGATCA ACGTGATCAT GACGGCGGTC GGGGTCCGGG TGCTGGATTC ATGA
 
Protein sequence
MSLDTFVKTF RRPFQFREFL EQTWMIARVS LVPTLLVAIP FTVLVAFTLN ILLREIGAAD 
LSGAGTAFGT ITQLGPVVTV LVVAGAGATA ICADLGARTI REEIDAMRVL GIDPIQRLVV
PRVLASTFVA LLLNGLVCLI GLSGGYVFSV FLQGVNPGAF INGLTVLTGL GELVLAEIKA
LLFGVVAGLV GCYRGLTVKG GPKGVGNAVN ETVVYAFICL FVINVIMTAV GVRVLDS