Gene Mvan_5203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5203 
Symbol 
ID4644304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5569391 
End bp5570233 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content65% 
IMG OID639808678 
Producthypothetical protein 
Protein accessionYP_955980 
Protein GI120406151 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.162258 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTACG ACGCCACCAT CCGGTTCCGC CGGCTGCTCC GATTCTTCCC CAGGGCCGTC 
GACACCGTGG GGGAGCAGGC GCTGTTCTAC GGCGAGACGT TCCGTTACGT CCCGAACGCG
CTGACCCGGT ACCGCAAGGA GACCATCCGG CTCATCGCCG AGATGTCCAT GGGGACCGGT
GCACTCGTGA TGATCGGCGG CACCGTCGGT GTCGCGGCGT TCATGACGCT GGCCTCGGGC
GGTGTGATCG CGGTGCAGGG TTACTCGTCG CTGGGCAACA TCGGCATCGA GGCACTCACC
GGCTTCCTGT CGGCGTTCCT CAACGTACGC ATCGTGGCGC CGGTGATCGC CGGTATCGCG
CTGGCGGCGA CCATCGGCGC GGGTGCCACG GCACAGCTGG GCGCGATGCG GGTCGCCGAG
GAGATCGATG CGGTGGAATC GATGGCGGTG CACGCGGTCT CGTATCTGGT GTCGACACGG
CTGATCGCCG GGCTGATCGC GATCGTCCCG CTGTACGCGC TGTCGGTGCT GGCGGCGTTC
TTCGCCGCGA GATTCACGAC GGTCTACATC AACGGACAGT CCGCGGGCCT CTACGACCAC
TACTTCAACA CATTCCTGAT CCCCAGCGAT CTGCTGTGGT CGTTCCTGCA GGCCATCGTG
ATGTCGATCG CGGTGATGCT GGTCCACACC TACTACGGCT ACAACGCCTC GGGTGGTCCC
GTCGGCGTGG GCATCGCCGT GGGTCAGGCG GTGCGGACCT CGTTGATCGT CGTGGTGACG
ATCGTGCTGT TCATCTCTCT CGCCGTATAC GGCGCGTCCG GCAACTTCAA CCTCTCCGGG
TAA
 
Protein sequence
MSYDATIRFR RLLRFFPRAV DTVGEQALFY GETFRYVPNA LTRYRKETIR LIAEMSMGTG 
ALVMIGGTVG VAAFMTLASG GVIAVQGYSS LGNIGIEALT GFLSAFLNVR IVAPVIAGIA
LAATIGAGAT AQLGAMRVAE EIDAVESMAV HAVSYLVSTR LIAGLIAIVP LYALSVLAAF
FAARFTTVYI NGQSAGLYDH YFNTFLIPSD LLWSFLQAIV MSIAVMLVHT YYGYNASGGP
VGVGIAVGQA VRTSLIVVVT IVLFISLAVY GASGNFNLSG