| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5201 |
|---|
| Symbol | |
|---|
| ID | 4645718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 5567151 |
|---|
| End bp | 5568176 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639808676 |
|---|
| Product | virulence factor Mce family protein |
|---|
| Protein accession | YP_955978 |
|---|
| Protein GI | 120406149 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.922675 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.183603 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGACA AGACCCTGAT CAACGTCGGC GTCTTCACCG TGGCGATGCT TCTGGTCGCG
GCGATGCTCG TCGTCGTCTT CGGCGAGTTC AGGTTCGCGT CGGAGGACAA GTACCACGCG
ACGTTCACCG ACGCGTCGCG GTTGAAGGCC GGACAGGACG TGCGTATCGC CGGTGTCCCG
GTCGGAACCG TCGAGGGCCT GACGCTCAAC CCCGACAACA CCGTCGACGT GGCGTTCACC
GTCAACGACC GCTACCAGCT CTACACCTCC ACCAAGGCCG TGGTCCGCTA CGAGAACCTG
GTCGGCGACC GCTACCTGGA GATCACCTCC GGCCCCGGCG ATCTCGTCAA GCTTCCGAAG
GGCGGCACCA TCACCCACAC CGAGCCGGCG CTGGATCTCG ACGCGCTGCT CGGAGGGCTG
AAGCCGGTGG TCAAGGGGCT CGACGGTGCC AAGATCAACG AGATCAGCAA CGCCGTCATC
GAGTTGCTCC AGGGCGAGGG CGGCGCGCTG TCGGCGATGC TGTCGAACAC CAGCGCGTTC
ACCCAGAACC TCGCCGCGCG CGATCAGCTC ATCGGTGACG TGATCAACAA CCTCAACACC
GTGCTGGGCA CCGTCGACGA GAAGGGCGCC GAGTTCAACG CCAGCGTCGA CCAGTTGCAG
AAACTGATCA CCGGGCTGGC CGAAGGCCGT GATCCGATCG CGGGCGCGAT CGGTCCGCTG
GCCACCGCGG AGAACGATCT GACAGCCATG TTGGAGGCGT CGCGGCGGCC GGTGCAGGGC
GTCATCGAGA ACGTGCGCCC GTTCGCCCAG CGGATGGACG AACGCAAGGG CGACGTCAAC
AAGGTCATCG AGCCGCTGGC CGAGAACTAC CTGCGGCTCA ACGCGCTCGG CGCCTACGGC
TCGTTCTTCA ACATCTTCTA CTGCTCGACG CGGCTGAAGA TCAACGGCCC CGCGGGCAGC
GACATCCTGG TCCCGTTCGG CGGCCCGCCG GATCCGAGCA AGGGGAGGTG TGCCGAAGTT
GAGTAG
|
|---|
| Protein sequence | MRDKTLINVG VFTVAMLLVA AMLVVVFGEF RFASEDKYHA TFTDASRLKA GQDVRIAGVP
VGTVEGLTLN PDNTVDVAFT VNDRYQLYTS TKAVVRYENL VGDRYLEITS GPGDLVKLPK
GGTITHTEPA LDLDALLGGL KPVVKGLDGA KINEISNAVI ELLQGEGGAL SAMLSNTSAF
TQNLAARDQL IGDVINNLNT VLGTVDEKGA EFNASVDQLQ KLITGLAEGR DPIAGAIGPL
ATAENDLTAM LEASRRPVQG VIENVRPFAQ RMDERKGDVN KVIEPLAENY LRLNALGAYG
SFFNIFYCST RLKINGPAGS DILVPFGGPP DPSKGRCAEV E
|
|---|
| |