| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5198 |
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| Symbol | |
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| ID | 4645715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | - |
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| Start bp | 5563567 |
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| End bp | 5564727 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639808673 |
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| Product | virulence factor Mce family protein |
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| Protein accession | YP_955975 |
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| Protein GI | 120406146 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.18609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.284434 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGTC GCGTGCTGGG TCTCTCGTCG ATCCCGCTGT TGCTGGCCGG TTGCCAGTTC
GGCGGACTGA ACTCGTTGAA CATGCCGGGC ACCGCCGGGC ACGGCAACGG CTCGTACACG
ATCAGCGTCC AGTTGCCGGA TGTGTCGACG CTGCCGCAGA ACTCACCGGT GATGGTGGAT
GACGTCACGG TCGGCAGTGT GTCCGGTGTG GACGCGGTGC AGCGGCCCGA CGGAACGTTC
TTCGCGGAGC TGCAACTGTC CCTCGACGGC AACGTCAAGT TGCCGGCCAA CGCGACCGCC
AGGGTGGCGC AGACGTCGCT GCTCGGTTCG CAGCATCTGG AACTCGCCGC GCCCGCCGAC
GGATCCGGAA CAGGAACCCT GGCCGAGGGC TCCCAGATAC CGATCGAGCG CACCGGCAAC
TACCCGACTA CCGAACAGGT GCTGTCCTCC CTCGGTGTGG TGGTCAACAA GGGCAATCTC
GGTGCACTGC AGGACATCAC CGACGAGACC TACAACGCCG TGGTCGGACG GTCGGGCACC
TTCGCCGACC TGATCCCCAG GCTGGCGGAG CTGACCGCGT CGCTGGATCG GCAGACCGAC
GACATCATCG CCGCCGCCGA AGGGCTGAAC CGCTTTGCGG GAATCCTGGC CCGCAGCAAG
GACAGCCTGG GTCGCACACT CGACACGCTG CCCGAGGCGC TGCAGGTGCT CAACGACAAC
CGCGCGCAGA TCGTCGACGC GTTCACCGCG CTGCGCAGCT TCGCCACCGT GGCGTCCCGG
GTGTTGCAGG AGACCAAGGA CGACTTCGCC GCCGACTTCA AGGATCTGTT CCCGGTCATC
AAGGCGCTCA ACGACAACGC CGACTTCTTC ATCAAGGACC TGGAGTTCCT GCCCACGTTC
CCGTTCCACT ACAAGTACCT GCGCAACGCC GTGCGCGGGG ACTACCTGAA CGTGTACACC
ACGTTCGACC TGACCTTGCG CCGCGTAGGT GAGTCGGTGT TCACCACGTC GCTGGGCCTG
GACCCGAACA TGAAGCGCAT GAGCGAGGTC GTCAACCCGC CCGACTTCCT CACCGGCGCG
GTGGCCAACC TCTCGGGACA GGCGGCCGAT CCGTTCAAGA TCCCGCCGGG CACCGCGACG
CAACACGAGG GGGCGCCGTA A
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| Protein sequence | MIRRVLGLSS IPLLLAGCQF GGLNSLNMPG TAGHGNGSYT ISVQLPDVST LPQNSPVMVD
DVTVGSVSGV DAVQRPDGTF FAELQLSLDG NVKLPANATA RVAQTSLLGS QHLELAAPAD
GSGTGTLAEG SQIPIERTGN YPTTEQVLSS LGVVVNKGNL GALQDITDET YNAVVGRSGT
FADLIPRLAE LTASLDRQTD DIIAAAEGLN RFAGILARSK DSLGRTLDTL PEALQVLNDN
RAQIVDAFTA LRSFATVASR VLQETKDDFA ADFKDLFPVI KALNDNADFF IKDLEFLPTF
PFHYKYLRNA VRGDYLNVYT TFDLTLRRVG ESVFTTSLGL DPNMKRMSEV VNPPDFLTGA
VANLSGQAAD PFKIPPGTAT QHEGAP
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