Gene Mvan_5173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5173 
Symbol 
ID4647457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5536828 
End bp5537244 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content65% 
IMG OID639808647 
Producthistidine triad (HIT) protein 
Protein accessionYP_955950 
Protein GI120406121 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.707443 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACG GCATGGCGAC TGTCTTCACC AGGATCATCA ACCGCGAGCT GCCCGGGCGA 
TTCGTCTACG AGGACGACGA CGTCGTCGCG TTCCTGACGA TCGAGCCGAT GACGCAGGGG
CACACGCTGG TGGTGCCGCG CGAGGAGATC GACAACTGGC AGGACATCGA CCCCGCCGAG
TTCGCCCGCG TCATGGAGGT GTCGCAGCTG ATCGGCAAGG CCGTCTGCAA GGCATTCGAC
ACCGAGCGCT CCGGGGTCAT CATCGCCGGA CTGGAAGTGC CGCACCTGCA CGTGCATGTG
TTCCCCGCCC GCAACCTGTC GGACTTCGGG TTCGCCAACG TCGACAGGAA CCCGTCGCCG
GAGTCGCTCG ACGAGGCACA GGCCAGGATC AAGGCCGCGC TAGCCGAGTT GAGCTGA
 
Protein sequence
MLDGMATVFT RIINRELPGR FVYEDDDVVA FLTIEPMTQG HTLVVPREEI DNWQDIDPAE 
FARVMEVSQL IGKAVCKAFD TERSGVIIAG LEVPHLHVHV FPARNLSDFG FANVDRNPSP
ESLDEAQARI KAALAELS