| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5171 |
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| Symbol | |
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| ID | 4647455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 5534352 |
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| End bp | 5535116 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639808645 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_955948 |
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| Protein GI | 120406119 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.458717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCCG GCCGTCGGGT ACTCATCACC GGGGCAGGCC AGGGCGTCGG TCGCGGGCTG
GCTCTTGCGT TCGGCGCCGC CGGCGCCGAG GTGCTCGTCA ACGACCTCCA CCGGGAACGC
AGCGAAAACG TCGTCGACGA AATCCGCGCC GCCGGTGGTT CGGCGACCCC GGCTCCGTTC
GACGTCTGCG ACTACGCGTC GGTGGTCACC GCGGTGGCGG CCACCGGGCC CGTCGACGTC
CTGGTGAACA ACGCGGGTAA CGCCGGCGCC GAAGGATTCG GCGGCAGAGC CAGATTCGCC
GACACCGAAC CGGTCGATTG GGACTCGTTT CTCCGCGTCA ATCTCTACGG CGTGCTGCAC
TGCACCAGGG CGGTCCTGCC GACGATGATC GCCAACACGT GGGGCCGCAT CCTGACGGTG
GTGTCAGACG CAGGCCGTAC CGGCGATCCC GGCGGCGCGG TGTACGGCGC GGCGAAGGCC
GGAGCCGCCG GCCTCATGCG GTCGGTGGCG CTGGAGAACG GCCGCTTCAA CGTCACCGCC
AACAACATCT CGCTCGGCAC GATGCGGACA CCGCTGACCG AACCGCTCTG GGCCGAGCAC
GGCGATTCCC CACAGGCCAA AGAGATCCTG CGCAACTACG CGATACGCCG GCCCGGGGTA
CCCGACGATG TCACCGAGTT GGCGCTGCTG CTGGCGAGCG ACCACGGATC GTGGATCACC
GGCCAGACCA TCTGCGTCAA CGGCGGGTAC TCATTCGGGC TGTGA
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| Protein sequence | MTSGRRVLIT GAGQGVGRGL ALAFGAAGAE VLVNDLHRER SENVVDEIRA AGGSATPAPF
DVCDYASVVT AVAATGPVDV LVNNAGNAGA EGFGGRARFA DTEPVDWDSF LRVNLYGVLH
CTRAVLPTMI ANTWGRILTV VSDAGRTGDP GGAVYGAAKA GAAGLMRSVA LENGRFNVTA
NNISLGTMRT PLTEPLWAEH GDSPQAKEIL RNYAIRRPGV PDDVTELALL LASDHGSWIT
GQTICVNGGY SFGL
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