| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5148 |
|---|
| Symbol | |
|---|
| ID | 4647508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 5513256 |
|---|
| End bp | 5513855 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639808622 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_955925 |
|---|
| Protein GI | 120406096 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3226] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGGCAG CGGTCACTCC CAAGGGAGAA CGTCGACGGT ATGCGCTGGT CAGCGCTGCT
GCCGATCTTC TCTGCGAAGG CGGGTTCGAC GCTGTCCGGC ACCGTGCCGT CGCGCGCCGG
GCGGGCCTGC CGCTGGCATC GACGACCTAC TACTTCTCCT CGTTGGACGA CCTGATCGCG
AAGGCCGTCG AACACGTCGG TACCCGGGAG AGCGAGCAGC TCCGAACCCG CGTGGAGACC
CTGTCGCGTC GCCGCCGCGG CGCGGAGTCC ACCGCCGACA TCATCGTGGA CCTTCTGGTC
GGCGACAATC CCGAACGCGT CACCGAGCAG ATCATCTCCC GTTACGAGCG CTATATCGCC
TGCGCGCGGC AACCGGGGTT GCGTGACATT CAGCGGCGCA TCCTGCGCCA GCGCAGCGAC
GCCGTCGTCG AGGTCGTCGA GCGCTCGGGC AGATCGGTGC GCACCGAGTT GGTCACCGCG
CTGGTGTGCG CGGTGGACGG GGCGGTCGTG GCGGCACTGG TCGGCGACGG CGAGGGGCCG
CGTGCCACCG CCAGGGCGAC CCTGATCGAC GTCATCGACG TGCTCGCGCC CTTCAACTAG
|
|---|
| Protein sequence | MTAAVTPKGE RRRYALVSAA ADLLCEGGFD AVRHRAVARR AGLPLASTTY YFSSLDDLIA
KAVEHVGTRE SEQLRTRVET LSRRRRGAES TADIIVDLLV GDNPERVTEQ IISRYERYIA
CARQPGLRDI QRRILRQRSD AVVEVVERSG RSVRTELVTA LVCAVDGAVV AALVGDGEGP
RATARATLID VIDVLAPFN
|
|---|
| |