Gene Mvan_5078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5078 
Symbol 
ID4644714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5444160 
End bp5444954 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content66% 
IMG OID639808548 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_955855 
Protein GI120406026 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGTTC ATCACCTCAA CTGTGGAACG ATACGGCCGA CGGGGGTCGG CACGATGGTC 
TGCCATGTAC TGCTCGTCGA ATCCGCGGAC GGACTGGTGC TCGTCGACAC GGGTTTCGGC
ACCCATGACT GCGAGGACCC GAACCGCTTC GGGCGCATCA GAAGCCGGTT CATCCGGCCC
AATTTCGACC GCGGCGAGAC CGCACTGAAC CAGATCAGAC AACTCGGATT CCGGCGCTCG
GACGTCCGTC ACGTTGTGGT GACGCACTTC GATGCCGACC ACATCGGCGG CCTGGCGGAC
TTCCCCGATG CGCTTGTTCA CGTCACGACC ACAGAAGCGT TCGGCGCCAT GCGATCCCCC
TCGATTCAGG AGCGGATTCG CTTCCGCCCC CCACAGTGGG CACACGGGCC GAGGATCGTC
GAGCACGACA TCGACGGCGA GGCGTGGCGC GGTTTCGCAG CGGCCAAGGA GCTCACCCAG
ATCGGGCCGG GCTTCGTCCT CGTCTCATTG CCGGGCCACA CCCGCGGCCA CGCATGCGTG
GCCGTCGATG CCGGACACCG CTGGCTGCTG CACGCCGGTG ACTCCTTCTA TCACCCTGGC
ACTCTCGCGG GCGCCCCGCC GGTGCCGAAG TGGACGGCCC GGCTGGAGAT GCTGGTGGCC
TCGGACAAGC AGAAGGTGAA ACAGAATCAC GTCCGGCTCG CCGAGCTGTA CCGTCGCCAG
GACCCCGATC TGATGATCCT GTGCTCCCAC GATGTCACAC TCTACGAACA GGCCAGGGCC
ACCGCGCAGA CGTGA
 
Protein sequence
MKVHHLNCGT IRPTGVGTMV CHVLLVESAD GLVLVDTGFG THDCEDPNRF GRIRSRFIRP 
NFDRGETALN QIRQLGFRRS DVRHVVVTHF DADHIGGLAD FPDALVHVTT TEAFGAMRSP
SIQERIRFRP PQWAHGPRIV EHDIDGEAWR GFAAAKELTQ IGPGFVLVSL PGHTRGHACV
AVDAGHRWLL HAGDSFYHPG TLAGAPPVPK WTARLEMLVA SDKQKVKQNH VRLAELYRRQ
DPDLMILCSH DVTLYEQARA TAQT