Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_5056 |
Symbol | |
ID | 4644793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 5411709 |
End bp | 5413358 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639808526 |
Product | type III restriction enzyme, res subunit |
Protein accession | YP_955833 |
Protein GI | 120406004 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1061] DNA or RNA helicases of superfamily II |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACTGACG GCCCACTGAT CGTCCAGTCC GACAAGACCG TGCTGCTCGA AGTCGACCAC GAGCAGGCCG GGGCCGCCCG CGCGGCCATC GCGCCGTTCG CCGAGCTCGA ACGCGCGCCT GAGCACGTCC ACACCTACCG CATCACGCCG CTGGCGCTGT GGAACGCCCG GGCCGCCGGA CACGACGCGG AGCAGGTCGT CGACGCGCTG GTGACGTTCT CCCGCTATGC CGTACCGCAG CCTCTTCTGG TCGACATCGT CGACACGATG GCCCGGTACG GGCGGCTGCA ACTCGTCAAG CATCCGGCGC ACGGTCTCAC GCTGGTCAGT TTCGACCGTG CCGTGCTCGA AGAGGTGCTG CGGAACAAGA AGATCGCGCC CATGCTCGGC GCCCGCCTCG ACGACGACAC CGTCATCGTG CACAACAGCG AACGTGGCCG CGTCAAGCAG ATGCTGCTCA AGATCGGCTG GCCGGCCGAG GACCTGGCCG GGTACGTCGA TGGCGAAGCG CACCCGATCG AACTCGCACA GGACGGTTGG CAGCTGCGCG ACTACCAACA GATGGCCGCC GACTCCTTCT GGGACGGCGG GTCTGGCGTG GTGGTGCTGC CCTGCGGGGC GGGCAAAACA CTGGTGGGGG CGGCCGCCAT GGCCAAGGCC GGCGCGACGA CCCTGATCCT CGTGACCAAC ACCGTCGCGG GCCGGCAGTG GAAGCGCGAA CTGGTGGCGC GGACGTCGTT GACCGAGGAG GAGATCGGCG AATACTCGGG CGAGCGCAAG GAGATCCGGC CGGTCACCAT CGCGACCTAT CAGGTCATCA CCCGCCGGAC CAAGGGCGAG TACAAGCACC TGGAGCTCTT CGACAGCCGG GACTGGGGCC TGATCATCTA CGACGAGGTG CACTTGCTGC CGGCGCCGGT GTTCCGGATG ACGGCCGACC TGCAGTCGCG CAGGCGGCTC GGTCTGACGG CAACCCTGAT CCGCGAGGAC GGCCGGGAGG GTGACGTGTT CTCGCTGATC GGTCCGAAGC GCTACGACGC GCCGTGGAAG GACATCGAGG CCCAGGGCTG GATCGCGCCC GCCGAATGCG TCGAGGTTCG CGTCACGATG ACCGACAACG AGCGAATGAT GTACGCAACC GCCGAACCCG ACGAGCGCTA CAAGCTGTGT GCGACCGCGC ATACGAAGAT CGCCGTGGTG AAGTCCATTC TGGAGCGACA CCCCGATGAA CCGACGCTGG TGATCGGCGC CTACCTCGAC CAACTCGACG AGCTCGGCAC CGAGTTGAAC GCACCGGTGA TCCAGGGATC GACGAAGAAT GCCGAACGTG AGGCATTGTT CGACGCCTTC CGCCGCGGCG AGATCCGCAC TCTGGTGGTG TCCAAGGTCG CGAACTTCTC CATCGACCTT CCCGAAGCGA GTGTGGCCGT ACAGGTTTCA GGGACGTTCG GTTCCAGACA AGAAGAGGCA CAGCGGTTGG GCCGGTTGTT GCGCCCCAAG GCCGACGGCG GCGGCGCCGT CTTCTACTCG GTGGTCTCGC GTGACAGCCT CGACGCCGAG TACGCCGCGC ACAGGCAGCG GTTTCTTGCC GAGCAGGGCT ACGGCTACGT CATCAAGGAC GCCGACGACC TGCTCGGTCC GGCGATCTGA
|
Protein sequence | MTDGPLIVQS DKTVLLEVDH EQAGAARAAI APFAELERAP EHVHTYRITP LALWNARAAG HDAEQVVDAL VTFSRYAVPQ PLLVDIVDTM ARYGRLQLVK HPAHGLTLVS FDRAVLEEVL RNKKIAPMLG ARLDDDTVIV HNSERGRVKQ MLLKIGWPAE DLAGYVDGEA HPIELAQDGW QLRDYQQMAA DSFWDGGSGV VVLPCGAGKT LVGAAAMAKA GATTLILVTN TVAGRQWKRE LVARTSLTEE EIGEYSGERK EIRPVTIATY QVITRRTKGE YKHLELFDSR DWGLIIYDEV HLLPAPVFRM TADLQSRRRL GLTATLIRED GREGDVFSLI GPKRYDAPWK DIEAQGWIAP AECVEVRVTM TDNERMMYAT AEPDERYKLC ATAHTKIAVV KSILERHPDE PTLVIGAYLD QLDELGTELN APVIQGSTKN AEREALFDAF RRGEIRTLVV SKVANFSIDL PEASVAVQVS GTFGSRQEEA QRLGRLLRPK ADGGGAVFYS VVSRDSLDAE YAAHRQRFLA EQGYGYVIKD ADDLLGPAI
|
| |