| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5045 |
|---|
| Symbol | |
|---|
| ID | 4644782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 5400151 |
|---|
| End bp | 5400561 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639808516 |
|---|
| Product | cold-shock DNA-binding domain-containing protein |
|---|
| Protein accession | YP_955823 |
|---|
| Protein GI | 120405994 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1278] Cold shock proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGACCG GCCGGGTGAA GTGGTACGAC GCGGAGAAGG GCTTCGGGTT CCTCTCGCAG
GAAGACGGTG AGGACGTCTA TGTGCGGTCC TCGGCGTTGC CCGCCGGTGT CGAAGGCCTG
AAAGCGGGTC AGCGCGTCGA GTTCGGCGTG GCCGCGGGCC GGCGTGGACC TCAGGCGCTG
AGCCTCAAGC TCATCGACCC GCCGCCGAGT CTGACCAGGA CGCGCCGGGA AGCCGCCGCG
GTCGAGCACA AGCACAGCCC GGACGAGCTG CACGGCATGG TCGAGGACAT GATCACGCTG
CTTGAGAGCG CGGTGCAGCC CGAGCTGCGC AAGGGCCGTT ACCCGGACCG CAAGGTGGCA
CGCCGGGTGT CCGAGGTGGT CAAGGCTGTC GCCCGCGAAC TCGACGCCTG A
|
|---|
| Protein sequence | MPTGRVKWYD AEKGFGFLSQ EDGEDVYVRS SALPAGVEGL KAGQRVEFGV AAGRRGPQAL
SLKLIDPPPS LTRTRREAAA VEHKHSPDEL HGMVEDMITL LESAVQPELR KGRYPDRKVA
RRVSEVVKAV ARELDA
|
|---|
| |