| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5040 |
|---|
| Symbol | |
|---|
| ID | 4644777 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 5393090 |
|---|
| End bp | 5394775 |
|---|
| Gene Length | 1686 bp |
|---|
| Protein Length | 561 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639808511 |
|---|
| Product | major facilitator superfamily transporter |
|---|
| Protein accession | YP_955818 |
|---|
| Protein GI | 120405989 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.16972 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGGAT CGCGGCGTGA CCACCGGGAC CCTGACGGTC AGCAGGGTGG ACGCTACTAC
CCTCCCCGCC CGCCCGCGGG CGAACACCCG GGGATGGCCA ACTACCCCAG CGATCCGGCG
ATGAGCCCGG GCAACCGCAG GTCCGGGCGC CCCGGCCCCT CGAGTCAGAG CGCGAATCGG
TGGCTGCCTC CGCTCGATGA CAGCTCCCGC CCACACGGCC ATTCCTACCC GCCTCCCCCC
GGCCGAGGCG CAGACGAGAA GGTCACGGTC ACGCGCGCAG CCGCGCAGCG CAGCCGCGAG
ATGGGCTCCA AGATGTACGG CCTGGTGCAT CGCGCGGCCA CCGCGGACGG CGCGGACAAA
TCCGGGCTGA CCGCGCTGAC GTGGCCGGTG GTCGCGAACT TCGCCGTCGA CGCCGCGATG
GCCGTGGCCC TGGCCAACAC CCTGTTCTTC GCGGCGGCCT CCGGTGAAAG CAAGAGCCGC
GTCGCGCTGT ACCTGCTCAT CACCATCGCC CCGTTCGCGG TCATCGCGCC GCTGATCGGA
CCTGCGCTGG ACCGGCTGCA ACACGGCAGG CGGGTCGCCC TGGCGGCCTC GTTCTCGCTG
CGCACCGTGC TGGCCGTCGT GCTCATCGCG AACTTCGACA GCGCGACGGG CAGTTTCCCG
TCGTGGGTGC TCTACCCGTG CGCGCTCGGA ATGATGGTGT TGTCCAAGTC GTTCTCGGTG
CTGCGCAGCG CCGTGACGCC ACGGGTGCTG CCGCCGACGA TCGACCTGGT CCGGGTGAAC
TCCCGGTTGA CGACGTTCGG CCTGCTGGGC GGCACGATGA TCGGTGGGGG CATCGCCGCG
GCCGCCGAAT GGGGCTTCCA GCTGTTCCAG ATGCCGGGGG CGCTGTACGT CGTGGTGGCG
GTGACGATCG GCGGCGCGGT CCTGGCCATG CGGATCCCGA AATGGGTCGA GGTCACCGCG
GGTGAGGTGC CCACGACCCT GAGCTATCAC GGTCAGACCG AGGGGCTTCG CCGGGAACCT
CATGGAGCCG TGTCCGCTAA GACCCGCCAG CCGCTCGGCC GCAACATCAT CACCGCGCTG
TGGGGCAACT GCACGGTCAA GGTGATGGTC GGTTTCCTGT TCCTGTATCC GGCCTTCGTC
GCCAAGGCGC ACGACGCCAG CGGCTGGGAG CAGCTGCGAA TTCTGGGGAT GATCGGCGCC
GCGGCCGCCG TCGGCAACTT CGCGGGCAAC TTCACCGCCG CCCGTCTCAA GCTCGGCCAT
CCGGCGCGGC TTGTGGTGCG TTGCGCCACT GCGGTCACCG TGATGGCGTT GGCGACGGCA
CTGTCCGGGA ACCTGCTGGT GGCCGCGGCC GCGACGCTCG TCACGTCCGG CGCCAGCGCC
ATCGCCAAGG CCTCGCTGGA CGCCTCCCTG CAGGACGACC TGCCCGAGGA GTCGCGCGCG
TCGGCGTTCG GCCGTTCCGA ATCGCTGCTG CAGCTGGCGT GGGTCGCCGG CGGCGCCACC
GGAGTGCTGA TCTATACCGA GCTCTACGCG GGCTTCACCA CCATCACCGC GATCCTGATC
CTCGGCTTGG CCCAAACCGT GCTGAGCTAT CGTGGCGAGT CACTGGTGCC GGGCTTCGGT
GGTAACCGTC CGGTACTCGC CGAACAGGAA GGTGTTTGGA CGGATGCGGC GGTGACCCGC
GAGTGA
|
|---|
| Protein sequence | MTGSRRDHRD PDGQQGGRYY PPRPPAGEHP GMANYPSDPA MSPGNRRSGR PGPSSQSANR
WLPPLDDSSR PHGHSYPPPP GRGADEKVTV TRAAAQRSRE MGSKMYGLVH RAATADGADK
SGLTALTWPV VANFAVDAAM AVALANTLFF AAASGESKSR VALYLLITIA PFAVIAPLIG
PALDRLQHGR RVALAASFSL RTVLAVVLIA NFDSATGSFP SWVLYPCALG MMVLSKSFSV
LRSAVTPRVL PPTIDLVRVN SRLTTFGLLG GTMIGGGIAA AAEWGFQLFQ MPGALYVVVA
VTIGGAVLAM RIPKWVEVTA GEVPTTLSYH GQTEGLRREP HGAVSAKTRQ PLGRNIITAL
WGNCTVKVMV GFLFLYPAFV AKAHDASGWE QLRILGMIGA AAAVGNFAGN FTAARLKLGH
PARLVVRCAT AVTVMALATA LSGNLLVAAA ATLVTSGASA IAKASLDASL QDDLPEESRA
SAFGRSESLL QLAWVAGGAT GVLIYTELYA GFTTITAILI LGLAQTVLSY RGESLVPGFG
GNRPVLAEQE GVWTDAAVTR E
|
|---|
| |