Gene Mvan_5021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5021 
Symbol 
ID4644631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5370535 
End bp5371971 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content68% 
IMG OID639808492 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_955799 
Protein GI120405970 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.796578 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCCA GGCGCAAGGC CATCATCCTG GTGTCCTGCT GCCTGAGCCT GCTCATCGTG 
TCGATGGACG CGACCATCGT CAACGTCGCC ATCCCGTCGA TACGCGACGA TCTGTCCGCG
ACACCCGCCC AGATGCAGTG GGTGGTCGAC GTCTACACCC TCGTGCTCGC CTCGCTGCTC
ATGCTCTCGG GCGCCACCGG AGACCGGTTC GGGCGCAGGC GGGTCTTCCA GATCGGCCTC
GCGGTCTTCG CGCTCGGGTC ACTGGCCTGC AGCCTGGCGC CCACCATCGA CGCGCTGATC
GGCGCCCGTC TGCTACAGGG CATCGGCGGA TCGATGCTCA ATCCTGTTGC GCTGTCCATC
ATTTCGCAGA TCTTCACCCA GCCGGTGGAG CGTGCCCGGG CGCTGGGCAT CTGGGGCGGG
GTGACCGGCA TCTCGATGGC GGCGGGCCCG ATCGTCGGCG GCCTGCTGAT CGATACCATC
GGCTGGCGGT CGGTGTTCTG GATCAACCTG CCGATCTGCG CCGCGGCCAT TCTTCTCACC
GCGATCTTTG TGCCCGAGTC GAAATCGCAG ACCATGCGCA ACGTCGACCC TATCGGTCAG
GGACTGGCGA TCATGTTCCT GTTCGGCACC GTCTTCACGC TGATCGAGGG TCCGGTGCTG
GGCTGGACCA ATCCGCGGGT GGTGGTGGCG GCCGTTGTCG TGGCGCTGGC CCTGGTCGCA
TTCCTGCGCT TCGAATCGCG GCGCCACGAC CCGTTCCTGG ATCTGCGCTT CTTCCGCAGC
ATCCCGTTCA CGACGGCGAC GGTCATCGCG ATCAGCGCTT TCGCCGCGTG GGGGGCGTTC
CTGTTCCTGA TGTCGCTCTA CCTGCAGGGC GAACGCGGCT TCTCGGCGAT GCACACCGGT
CTGATCTACC TGCCGATTGC AATCGGGGCA CTGCTTTTCT CGCCGTTGTC CGGCCGCCTC
GTCGGCCGCT ATGGCGCGCG GCCGTCCCTG GTGATCGCCG GGGTGACGAT CACCGCCGCG
GCGACCATGC TGACATTCCT GACCGCGACG ACGCCGGTGT GGTCGCTGCT GATGGTGTTC
GCGGTCTTCG GTATCGGCTT CTCGATGGTC AATGCGCCGG TCACGAATGC CGCCGTCAGC
GGGATGCCAC TCGACCGGGC CGGCGCGGCG TCCGCGGTGA CCTCGACGAG CCGCCAGGTC
GGCGTGAGTA TCGGTGTGGC GCTGTGCGGT TCGCTGGCGG GATCGGCGAT GGCCACCGGT
GGTGCGGACT TCGCGGCCGC CGCGCGGCCG CTGTGGTTCG TCTGCATGGC CCTGGGTCTG
GTGATCCTCG GTCTCGGCCT GTTCGCGACG TCGCAGCGGG CGCTGCGGTC CGCCGAGCGA
CTGGCGCCGC TGGTGTCGGG AGCGCCTGAA CCGGTGGGTG GTGCCCATGT CCGGTAA
 
Protein sequence
MTPRRKAIIL VSCCLSLLIV SMDATIVNVA IPSIRDDLSA TPAQMQWVVD VYTLVLASLL 
MLSGATGDRF GRRRVFQIGL AVFALGSLAC SLAPTIDALI GARLLQGIGG SMLNPVALSI
ISQIFTQPVE RARALGIWGG VTGISMAAGP IVGGLLIDTI GWRSVFWINL PICAAAILLT
AIFVPESKSQ TMRNVDPIGQ GLAIMFLFGT VFTLIEGPVL GWTNPRVVVA AVVVALALVA
FLRFESRRHD PFLDLRFFRS IPFTTATVIA ISAFAAWGAF LFLMSLYLQG ERGFSAMHTG
LIYLPIAIGA LLFSPLSGRL VGRYGARPSL VIAGVTITAA ATMLTFLTAT TPVWSLLMVF
AVFGIGFSMV NAPVTNAAVS GMPLDRAGAA SAVTSTSRQV GVSIGVALCG SLAGSAMATG
GADFAAAARP LWFVCMALGL VILGLGLFAT SQRALRSAER LAPLVSGAPE PVGGAHVR