| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5019 |
|---|
| Symbol | |
|---|
| ID | 4644629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 5368579 |
|---|
| End bp | 5370129 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639808490 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_955797 |
|---|
| Protein GI | 120405968 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.579081 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGAGG GACGCGTCGA CACCGTCATT GTCGGGGGCG GACACAACGG CCTGGTGGCC
GCCGCGTACC TGGCCAAGGC CGGCCGCAGT GTCCGGGTTC TCGAGCGTCT CGGCCATGTC
GGCGGCGCGG CGGTTTCGCT GTATCCGTTC GACGGGATCG ACGCCCGACT CTCCCGCTAC
TCGTATCTGG TCAGCCTGCT GCCGCGGCGC ATCGTCGACG ACCTCGGCGC GCGGATCAGG
CTGGCGCGGC GGCGGTACTC GTCCTACACG CCCGACCCGT CCGACGGCGG CCGCAGCGGC
CTGCTGATCG GACCGGAATC GACGTTCGGG GCCGTCGGCG CCGCCGCAGA CGAGGCCGGT
TTCGGCGAGT TCTACCGGCA GTGCGCAACG GTCACCTCCG CGCTGTGGCC GACGCTGACC
GAGCCGCTGC GCACCCGGTC GGAGGCGCAC CGCGCAGTGG TCGGCGCCGG AGGCCGCGAC
GCGTGGCAGT GGATGATCGA GCGTCCGCTG GCCGAGGCGA TCACCTCGGC CGTGGGCGAC
GATCTCGTCC GCGGTGTGAT GGCGACAGAC GCGTTGATCG GAACGTTCGC CCGGCTCGAC
GAGGAATCCC TGGTTCAGAA CCGGTGCTTC CTCTACCACC TGATCGGCGG CGGCACCGGC
GACTGGGACG TGCCCATCGG CGGGATGGGG GCGGTCAGCG AGGCGATGGC GGCCGCCGCC
ACCGGCTTCG GCGCCGAGAT CGTCACCGGC GCAGACGTTT ACGCGATCGA CCCGGAGGGC
CAGGTGCGCT ACCGGTGTGC CGACGACGAA CATGTCGTGG CCGCCCGGCA CATCCTCGCC
AACGTGACGC CCGCGGTGCT GGCCCGCCTG CTCGGGGAGG CCGAACCCGA ACTCGCCCCC
GGCGCGCAGG TCAAGGTCAA CCTCATGCTC ACCCGGTTGC CGCGACTGCG CGACGAAAGT
GTCACCCCGG AACAGGCTTT CGGCGGCACC TTTCACATCA ACGAGACCTA CCGTCAACTC
GACGCCGCCT ACCGGCAGGC GGCCGCCGGT TCGGTGCCCG ATCCGCTGCC GTGCGAGATC
TACTGCCACA CCCTGGCCGA CCCGACGATC CTGTCCGATT CGTTGCGGGC CGCGGGCGCA
CACACGCTGA CGGTGTTCGG CCTGCACACC CCGCACAGCC TGGCCGACTC GGCCACCCCT
GACCGGCTGC GCGACACTCT GACCTCGGCG GTGCTGACCT CGTTGAACTC TGTTCTGGCC
GAGCCGATTC AGGACGTCAT CATGCAGGAC TCGTCGGGCC GGTTGTGCAT CGAGGCCAAG
ACGACGTCGG ACCTCGACGA TGCCCTGGGT ATGACCGACG GCAACATCTT CCACGGCGCG
CTGTCGTGGC CGTTCGTCGA GGACGACGAG CCGCTCGCGA CGCCGGCCCA GCGATGGGGT
GTCGCCACCG CGCACGATCG AATTCTGTTG TGCGGGTCCG GTTCCCGTCG GGGCGGAGCC
GTGTCGGGCA TTGGTGGCCA CAACGCGGCG ATGGCGGTGC TGGAGCGCTA A
|
|---|
| Protein sequence | MSEGRVDTVI VGGGHNGLVA AAYLAKAGRS VRVLERLGHV GGAAVSLYPF DGIDARLSRY
SYLVSLLPRR IVDDLGARIR LARRRYSSYT PDPSDGGRSG LLIGPESTFG AVGAAADEAG
FGEFYRQCAT VTSALWPTLT EPLRTRSEAH RAVVGAGGRD AWQWMIERPL AEAITSAVGD
DLVRGVMATD ALIGTFARLD EESLVQNRCF LYHLIGGGTG DWDVPIGGMG AVSEAMAAAA
TGFGAEIVTG ADVYAIDPEG QVRYRCADDE HVVAARHILA NVTPAVLARL LGEAEPELAP
GAQVKVNLML TRLPRLRDES VTPEQAFGGT FHINETYRQL DAAYRQAAAG SVPDPLPCEI
YCHTLADPTI LSDSLRAAGA HTLTVFGLHT PHSLADSATP DRLRDTLTSA VLTSLNSVLA
EPIQDVIMQD SSGRLCIEAK TTSDLDDALG MTDGNIFHGA LSWPFVEDDE PLATPAQRWG
VATAHDRILL CGSGSRRGGA VSGIGGHNAA MAVLER
|
|---|
| |