Gene Mvan_5009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5009 
Symbol 
ID4644619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5361967 
End bp5362668 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content70% 
IMG OID639808480 
Producttwo component transcriptional regulator 
Protein accessionYP_955787 
Protein GI120405958 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.284196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.882339 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGTG GTGCCGGCTC ACCCAAGGTG CTCGTGGTCG ACGACGATCC CGACGTCCTG 
GCCTCACTCG AGCGTGGCCT CCGGCTGTCC GGGTTCGACG TCTACACCGC CGTCGACGGC
GCCGAGGCGC TGCGCAGCGC CACCGAAACC CGTCCGGACG CGATCGTCCT GGATATCAAC
ATGCCGGTTC TCGACGGGGT GTCCGTGGTG ACCGCGCTGC GGGCGATGGA CAACGACGTG
CCGGTCTGCG TCCTCTCGGC CCGCTCGTCC GTCGACGACC GTGTCGCCGG TCTGGAGGCC
GGCGCCGACG ACTACCTGGT CAAGCCGTTC GTGCTGGCGG AGCTCGTCGC GCGGGTCAAG
GCGCTGCTGC GCCGGCGCGG GTCGACCGCG ACGTTCTCGT CGGAAACCAT CACGGTCGGA
CCGCTCGAGG TGGACATCCC GGGACGGCGG GCCCGGGTGG ACGGCGTCGA CGTCGACCTG
ACCAAGCGTG AGTTCGATCT GCTGGCCGTG CTCGCCGAAC ACAAGACCGC GGTGCTGTCC
CGCGCGCAGC TGCTCGAGCT GGTGTGGGGC TACGACTTCG CCGCCGACAC GAACGTCGTC
GACGTCTTCA TCGGCTACCT GCGGCGCAAG CTCGAGGCCA ACGGTGCACC GCGACTGCTG
CACACCGTCC GCGGGGTGGG ATTCGTCCTC AGGCAGCAGT AG
 
Protein sequence
MDSGAGSPKV LVVDDDPDVL ASLERGLRLS GFDVYTAVDG AEALRSATET RPDAIVLDIN 
MPVLDGVSVV TALRAMDNDV PVCVLSARSS VDDRVAGLEA GADDYLVKPF VLAELVARVK
ALLRRRGSTA TFSSETITVG PLEVDIPGRR ARVDGVDVDL TKREFDLLAV LAEHKTAVLS
RAQLLELVWG YDFAADTNVV DVFIGYLRRK LEANGAPRLL HTVRGVGFVL RQQ