Gene Mvan_5006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5006 
Symbol 
ID4645069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5357148 
End bp5359052 
Gene Length1905 bp 
Protein Length634 aa 
Translation table11 
GC content67% 
IMG OID639808477 
ProductABC transporter-related protein 
Protein accessionYP_955784 
Protein GI120405955 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGATA CCGGGTTCGA CTCTCTACGT GCGGCGCCCT CGATCGGGCC GCCGCCGAAA 
CGGGTGAAGC CGAGTTCGGA TCTGTGGCGG ATGATGCCAT ACCTGCTGCC CTACCGCGGC
CGCTGGATCG TGATGATCGT GGTGGCGCTG GCCAGTCTCG CGGCCACCAT CTCGATCCCG
CTGATGACCA AGGCCGTGAT CGACGGGCCG GTGCGCCACC AGGATCAGCA GGGCCTCTGG
CTGGTCGGCG CCGCGGCCGT CGCTGTGGGA GTCACCGAGG CGGTGCTGTG GTTCATCCGG
CGTTGGCTGG TGGCCCGCGC GACGATGGGC GTGGAGGCCG ACATCCGCAA GCAGCTCTAC
GCGCGGCTGC AGATCCTGCC GATGTCGTTC CACGGCCAGT GGCAGTCCGG GCAGTTGCTG
TCGCGAATCA TGAACGACCT GAGCACGATT CGGCGGTTCA TGTCGTTCGG CCTGATCTTC
CTGATGCTCA ACGTGCTGCA GATCACCGTG GTCACCGCGA TCCTGCTGGC GATGTACTGG
CCGCTCGGCG TGGTCGTGTT GGTCTCGATC GTGCCGATCA CGCTGACGGT GCTGCATTTC
CAGCAGGAGT ACACCCGGCT GTCGCGGCTC GCCCAGGACC AGGCCGGCCA CGTCGCCACC
CATGTCGAGG AGGCCGCGCT CGGGCTGCGC GTGATCAAGT CGTTCGGCCG CGAGGACTAC
GTCTACGAGC GTTTCGACGA CCAACTCACC GACCTGTACG ACACCCAGGT CAGCCGCGTG
TCGGTGTCGG CGAAGTTCTG GACTCTGCTG GAGATCATCC CGAACCTGAC CCTGATCGTC
GTGCTCGGTT TCGGTGCCTA CGCTGCGGGC CACGGCTACG TGACGATGGG AACCCTGGTG
GCGTTCATCA CGATGATGCT GTCGCTGGTG TGGCCGATCG CGTCGCTGGG CTTCCTGCTG
TCGATGACCC AGGAGTCGTT CACCGCCGCG AACCGCATCG CCGAGATCTT CGACGCGCCA
CGGGAGATCA CCGACGGCCC GCGCGATCAG GCACCCCGCG GCGGCCGGCT CGAAGTCGTC
GACGTCGGCT TCCGCTTCCC GGACTCCGCG TCCGGGGACT GGGCACTGCG CCACGTCACC
GTCACCGTCG AACCGGGGGA GACGCTGGCA CTGGTCGGCG CGACCGGATC GGGAAAGTCG
GTGCTGGCGG GACTGCTGTC CCGGCTCTAC GACGTCACCG AGGGCGAGAT CCGCATCGAC
GCCCAGGATA TCCGCGAACT GTCGCTGGAC GCACTGCGCC GCACGGTGGC CACCGCGTTC
GAGGATCCGA CGCTGTTCTC GATGTCGGTC GCCGAGAACC TCCGACTCGG ACGTCCGGAG
GCGACGGACG ACGACCTGCG CCGGGCCATC GACGTCGCCG CCGCGCAGTT CGTCTACGAC
CTGCCCTTCG GGCTGGACAC CCGCATCGGT GAGCAGGGCA TGAGCCTGTC CGGCGGTCAG
CGTCAACGGA TTTCGCTGGC ACGCGCTATC CTGGCCGACC CGCGGATCCT GGTGCTCGAC
GACACCCTGT CGGCACTGGA CGTGCACACC GAGGCAGTGG TCGAAGAATC GCTGCGTCGC
GTGCTGCACG ACGTGACCGC CATCGTCGTC GCACATCGCG CCTCCACCGT GCTGCTCGCC
GATCGGGTCG CGCTGTTGCG GAACGGCACC ATCACCCACG TCGGCACCCA CGCCGAACTC
CTCGCCAACG TGCCCGAGTA CCGCTATCTG TTGGCCGCCG ACGACGAGCT CGATGACGGC
AGCGAACGCG AATGTGATTG GGAAGAGCAG GAAGAACGCG CCCGGCTGGA CCGCGACGAG
GAATGCGCCC GCGTCGACCA CGAGGTGCTG GGAAGGCGCG CATGA
 
Protein sequence
MADTGFDSLR AAPSIGPPPK RVKPSSDLWR MMPYLLPYRG RWIVMIVVAL ASLAATISIP 
LMTKAVIDGP VRHQDQQGLW LVGAAAVAVG VTEAVLWFIR RWLVARATMG VEADIRKQLY
ARLQILPMSF HGQWQSGQLL SRIMNDLSTI RRFMSFGLIF LMLNVLQITV VTAILLAMYW
PLGVVVLVSI VPITLTVLHF QQEYTRLSRL AQDQAGHVAT HVEEAALGLR VIKSFGREDY
VYERFDDQLT DLYDTQVSRV SVSAKFWTLL EIIPNLTLIV VLGFGAYAAG HGYVTMGTLV
AFITMMLSLV WPIASLGFLL SMTQESFTAA NRIAEIFDAP REITDGPRDQ APRGGRLEVV
DVGFRFPDSA SGDWALRHVT VTVEPGETLA LVGATGSGKS VLAGLLSRLY DVTEGEIRID
AQDIRELSLD ALRRTVATAF EDPTLFSMSV AENLRLGRPE ATDDDLRRAI DVAAAQFVYD
LPFGLDTRIG EQGMSLSGGQ RQRISLARAI LADPRILVLD DTLSALDVHT EAVVEESLRR
VLHDVTAIVV AHRASTVLLA DRVALLRNGT ITHVGTHAEL LANVPEYRYL LAADDELDDG
SERECDWEEQ EERARLDRDE ECARVDHEVL GRRA