Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_4999 |
Symbol | |
ID | 4645062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 5345798 |
End bp | 5346751 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639808470 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_955777 |
Protein GI | 120405948 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCCCG CCCGCAACAC AGAATCATGC TTGACTGTCG GCGTGTCTGA GGCCCGGACC GGTGATGCCG ACGGTGATCT CGCCGATGCG GTGGCAGCGT TCACCGCGGT GCGACCGCGG ATCTTCGGTG TGGCGTACCG GATGCTTGGC AGTGTCGCCG AAGCCGAGGA CGTCCTGCAG GAAGTGTGGC TGCGGTGGCA GAAGTGTGAC CGCCGGGCGG TGCGCGATCC CGCGGCGTTC CTGATCACGG CGACCACCCG CCTCAGCATC AACGAGCGGC AGTCCGCCCG GGCGCGTCGC GAAACCTACA TCGGCCCTTG GCTTCCCGAC CCGGTGGACA CCGGTGCCGA CCCGACGCTG GGCGCTGAAC GGGCCGAGGC GCTCGAGTTC GCGACGTTGA TGTTGATGGA GCGGCTCACG CCGGCCGAAC GTGCGGCCTA TGTGCTACGG GAGGCTTTCG ACTACCCGTA CGGGCTGATC GCCGAGACGA TCGAAACCTC TCAGGCCAAT GCCCGTCAGC TCGTCAGCCG GGCCCGCAGG CATCTGGCCG AGGCGCGCCG TCACGACGTC GACCCCGCCG AACAGCGCCA ACTGCTCACC GCCTTCGTGG CGGCGGCGCA GAACGGGGAC ATGGCTACGT TGGAGAGCCT GTTCGCCGAG GACATCGTCA GTTACACCGA CGGCAACGGT ATCCGCAACG CGGCACGGCA CCCCGTCGTC GGGCGCGAAA CCGTGGCCCG GTTCGTCTGC GCGTTCCGCC GGCGCGTGTT CGCCGACGCG GTGTTGACCT GGGTGACGGT CAACAGCGCA CCGGCGGTGG TGATTTCGCA CGGCGGTGGC CCCTTCCACG ACGGTGGCGT CTTCGAGACG TTCGTCGCGC TCACCCCGTC CGAGCGTGGG ATCACCCAGC TGCTGTGGCA CCGGCTGGAG GGCAAGGTCA GCCATCTGGG ATGA
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Protein sequence | MSPARNTESC LTVGVSEART GDADGDLADA VAAFTAVRPR IFGVAYRMLG SVAEAEDVLQ EVWLRWQKCD RRAVRDPAAF LITATTRLSI NERQSARARR ETYIGPWLPD PVDTGADPTL GAERAEALEF ATLMLMERLT PAERAAYVLR EAFDYPYGLI AETIETSQAN ARQLVSRARR HLAEARRHDV DPAEQRQLLT AFVAAAQNGD MATLESLFAE DIVSYTDGNG IRNAARHPVV GRETVARFVC AFRRRVFADA VLTWVTVNSA PAVVISHGGG PFHDGGVFET FVALTPSERG ITQLLWHRLE GKVSHLG
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