Gene Mvan_4968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_4968 
Symbol 
ID4648296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5314715 
End bp5316184 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content70% 
IMG OID639808439 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_955746 
Protein GI120405917 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCTGT TCGCCCTCCT CGACCAGACC GCGGCGCGCC ACGGTGACCG CGGCGCGGTG 
TATCACGGTG AGCGACTGGT CCATACGTGG TCGTCGCTGC GCGAGCGGGC GCTGCGGCTC
GCGTCGTCGT TGCGGGAGTT CGGGCCGGGC GCGCGGATCG CGGTGGCCAG TGAGAACAGG
CCCGAGATCG TCGAGTTGAT GTTCGCGATC TGGGCGGCCG AGTGCGTGTT CGTTCCGCTG
AACTACAAAC TGCATGTCCG GGAGATGGAG CAGATCCTGT CCGATGCCGG CGCGGCGCGG
GTGTTCACGT CGCCGAAGAT CGGCGCGGAG CTGGCACCGG TGGCGTCGAC CGGGATCGAG
ATCATCGGCG CCGCGGAGTA CGAGAGCCGT TGCGCCGCCA TGCCTTCGCC GGCCCCGCGG
GACACCGACC CGGCGTCGCC GGCCTGGCTG TTCTACACCA GCGGCACCAC CGGTAGGTCG
AAGGGCGCGA TGCTGTCACA TCGCAACCTG ATGGCGATGA CGGTGTCGCA CCTGGCCGAC
TTCGACTGCC CCGACGAGAA CTCCAGCCTG ATCCACGGCG CCCCGATGTC GCACGGATCG
GGACTGTATG TGCCACCGTA TGTTTCGCGT GGCGCGCGGC AGGTGGTGCC GGCGTCGGGC
ACGTTCGACC CGGACGAGTT CCTCGACCTG TGCGAGAGCC ATCCCGGCTG CAGCGCGTTC
CTGGCGCCGA CGATGGTGGC GAGGCTCGTG CAGACGGGCC GGGCCTGCCC GGCCAATCTG
AGGACGATCG TCTACGGCGG GGGCCCGATG TACGTCGACA GCCTGAAGAA GGCGATGGCG
GCGTTCGGCC CGGTCTTCGT GCAGCTCTAC GGGCAGGGCG AGGCGCCGAT GACGATCACC
GGGCTGCGAC GCCGGGATCA CCTCGACGCG CCCGACGCGG TACTGGGGTC GGTCGGGTAC
GCGCGCTCGG GCGTCGACGT CGCAGTGCTG GGTCCCGACG GGGCCCCCGT GGCGGTCGGC
GAGATCGGCG AGATCGTCTG TCGCGGCGAT GTGGTGATGT CGGGGTACTG GCAGAACCCG
GAGGCGACGG AGGCGGCGTT GCAGCACGGG TGGCTGCGCA CCGGGGACAT GGGCTCGTTC
GACGCCCACG GCTTCCTGAC CCTGCGGGAC CGGTCCAAGG ACGTGGTGAT CAGCGGCGGC
AGCAACATCT ACCCCCGCGA GGTCGAAGAG GTGCTGCTGG AACATCCGGG CGTCGTCGAG
GCCGGTGTGG TCGGGGCGCC CGACGAGGAA TGGGGCGAGG TGGTGGTCGC CTTCATCGTC
GGCGCGGCAT CGGCCGCCGA TCTGGACGCG CACCTGCTGG AACGCATCGC GAGGTTCAAG
CGGCCGAAGC GGTACGAGTT CGTCGACGAG CTACCGAAGA ACAGCTACGG CAAGGTGCTC
AAGCGGGAAT TGCGCGCCCG GCTCGGCTAG
 
Protein sequence
MNLFALLDQT AARHGDRGAV YHGERLVHTW SSLRERALRL ASSLREFGPG ARIAVASENR 
PEIVELMFAI WAAECVFVPL NYKLHVREME QILSDAGAAR VFTSPKIGAE LAPVASTGIE
IIGAAEYESR CAAMPSPAPR DTDPASPAWL FYTSGTTGRS KGAMLSHRNL MAMTVSHLAD
FDCPDENSSL IHGAPMSHGS GLYVPPYVSR GARQVVPASG TFDPDEFLDL CESHPGCSAF
LAPTMVARLV QTGRACPANL RTIVYGGGPM YVDSLKKAMA AFGPVFVQLY GQGEAPMTIT
GLRRRDHLDA PDAVLGSVGY ARSGVDVAVL GPDGAPVAVG EIGEIVCRGD VVMSGYWQNP
EATEAALQHG WLRTGDMGSF DAHGFLTLRD RSKDVVISGG SNIYPREVEE VLLEHPGVVE
AGVVGAPDEE WGEVVVAFIV GAASAADLDA HLLERIARFK RPKRYEFVDE LPKNSYGKVL
KRELRARLG