Gene Mvan_4965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_4965 
Symbol 
ID4648293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5311701 
End bp5312444 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content68% 
IMG OID639808436 
Productregulatory protein GntR, HTH 
Protein accessionYP_955743 
Protein GI120405914 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA CGGCCGGTGA TCACCGCTAC CTGCAGGTGG CGCGCGCACT GCGCAAGGAA 
ATCGTCGACG GCATCTATCC GGTGGGCTCG CAGTTGCCCA CCGAGCACGA ACTGTGCGAG
CGGTTCGCCG TCAGCCGCTA CACCATCCGC GAGGCGCTGC GCCGGCTGCG CGACGACAAC
CTCGTCGAAT CCCGGCCCCG GGCAGGCACT CTGGTGGTCC CCCGGCCCAG CACGAACTCA
TATGCCCAGG ATGTCGTGTC GATCGACGAT CTGCTGGCGT TCGCCCAGGG TGCGCAGTTC
TCGATCGAGA CCAACGGGAT GGTCACGGTC GACGATGCGC TCGCCGAGCG GACCGGGCTG
GCCCCGGGCT CGGAATGGTT TGCGGTGAGC GGATACCGGC GCGCCGATGA CGACACGGCG
CCGATCTGCC GGACCGAGTA TTTCATCAAC CGCAGCTTCG CCGCGGTGGG CCGACTGCTG
CAGCGCCACA CCGGCCCGAT CTTCCCGCTG ATCGAGGACC TGTTCGGGGT CAGCATCGTC
GAGGTGCATC AGGAGATCTC GGCGGTGGTG CTCGACGCCG ACCTCGCCGC ACACCTGCAG
GCCGAGGTCG GCGCCGCGGC ACTGCAGATG CAGCGCACCT ACACCACCTC CGACGGCGAG
ATCGCCCAGG TGACCGTCAA CACCCACCCG TCGTCGAGGT TCCGCCATTC CATGACGATG
CGCAGGGTCA GGGACACTGC GTGA
 
Protein sequence
MTATAGDHRY LQVARALRKE IVDGIYPVGS QLPTEHELCE RFAVSRYTIR EALRRLRDDN 
LVESRPRAGT LVVPRPSTNS YAQDVVSIDD LLAFAQGAQF SIETNGMVTV DDALAERTGL
APGSEWFAVS GYRRADDDTA PICRTEYFIN RSFAAVGRLL QRHTGPIFPL IEDLFGVSIV
EVHQEISAVV LDADLAAHLQ AEVGAAALQM QRTYTTSDGE IAQVTVNTHP SSRFRHSMTM
RRVRDTA