| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_4960 |
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| Symbol | |
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| ID | 4648288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | - |
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| Start bp | 5304897 |
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| End bp | 5305844 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639808431 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_955738 |
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| Protein GI | 120405909 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.588653 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTGACC TGCGTTTCGA CGGCCGTGTC GCCGTCGTCA CCGGCGCCGG CCGCGGCCTG
GGCCGCGCAT ACGCGCTGAT GCTGGCCGCC GACGGCGCCA AGGTGGTGGT CAACGACTCC
GGTGGCGCCC TCGACGGTGA GGGTGCCGAT ACCGGCCCGG CCCAGGCCGT CGTCGACGAG
ATCGCCTCGG CGGGAGGCGA AGCCGTCGCC AACACCGACA GCGTCGCCAC CCCCGAAGGG
GGGCGGGCCA TCATCGCTGA CGCGCAGCAA CGTTTCGGCG GCGTCGACAT CCTGATCCAC
AACGCGGGCA TCGTGCGGCG GGCGCCGCTG GCCGAGATGA CGTACGACGA TTTCGAAGCC
GTGCTCGACG TGCATCTGCG CGGCGCGTTC CACGTCGTGC GGCCGGCCTT TCCCTCGATG
TGCGACGCGG GCTACGGCCG GATCGTGCTG ACGTCGTCGA TCGGCGGGCT CTACGGCAAC
CACGAGGTCG CCAACTACGC CGTCGCCAAG GCCGGCGTGA TCGGGCTGTC CCACGTCGCG
GCGATGGAGG GTGCGGCGCA CGACGTCAAG AGCAACGTCA TCGTGCCCGC CGCGGTAACC
CGGATGGCCG CCGGTATCGA CACGTCGGCC TACCCGCCGA TGGGGCCCGA ACTCGTCGCC
CCCGTCGTGG GCTACCTGGC TCACGAAACC TGTGCGGTCA CAGGGGAGAT GTTCGTCGCG
CTGGCCGGCC GTGTCGCCAC CGCCGCGGTG ACCGAGACAC GCGGGGTGTA CCGGCCGTCG
TGGACGATCG CCGACGTCGC CGAGAACCTC GACGCGATCC GCGACCGGTC CGAGTCGCTC
ACCTTCCCGG TGGTGCCGAA CGGGCACGGA GACCACATCC GCTACAGCTT CGCGATGGCG
AGCCGGGCGG CGGCGATGAG CGCTTGCGCG AAGAGCAGAT CACGATGA
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| Protein sequence | MADLRFDGRV AVVTGAGRGL GRAYALMLAA DGAKVVVNDS GGALDGEGAD TGPAQAVVDE
IASAGGEAVA NTDSVATPEG GRAIIADAQQ RFGGVDILIH NAGIVRRAPL AEMTYDDFEA
VLDVHLRGAF HVVRPAFPSM CDAGYGRIVL TSSIGGLYGN HEVANYAVAK AGVIGLSHVA
AMEGAAHDVK SNVIVPAAVT RMAAGIDTSA YPPMGPELVA PVVGYLAHET CAVTGEMFVA
LAGRVATAAV TETRGVYRPS WTIADVAENL DAIRDRSESL TFPVVPNGHG DHIRYSFAMA
SRAAAMSACA KSRSR
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