Gene Mvan_4942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_4942 
Symbol 
ID4648927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5287505 
End bp5288065 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content70% 
IMG OID639808413 
Productisochorismatase hydrolase 
Protein accessionYP_955720 
Protein GI120405891 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0334336 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCCA TGACAACTCT GGACAATCGG CCCGACTCCG CGCTGCTCGT CGTCGACGTG 
CAGACCGCCG TGGTCGAGGG CGCATACCGG CGCGATGAGG TGGTGGCCAA CATCGCGGCC
CTGGTTCGCC GGGCGCGCGC GAAAGGCGTT GCGGTGGTGT GGGTGCAGCA CAGCGACGCC
GACCTCGTCC GGGGAAGCGA CGGCTGGCAG ATAGTGCCCG AAATGTCACC GGACGACGGC
GAGCCGGTCA TCGAGAAGCA CTACGGCGAC GCCTTCGAGG ACACCGACCT GGAGCAGGTC
TTGACCGACA GCGGAGTGGG CCGACTCGTC GTGGTGGGCG CGGAGACCGA CGCCTGTGTG
CGGTCCACTC TCCATGGCGC CTTCACCCGC GGCTACGACG TCGCCCTTGT CGGCGACGCC
CATACCGCGG GCGACAAGAC GCAGTGGGGC GCCCCTCCGG TCGAGGCGGT CATCGCCCAC
ACCAACCTGT ACTGGTCGTA TCAGGCCGCG CCCGGGCGCA CCGCGGCGGT GGCGACCGCC
GCCGAAATCG ACCTCGAATA G
 
Protein sequence
MAAMTTLDNR PDSALLVVDV QTAVVEGAYR RDEVVANIAA LVRRARAKGV AVVWVQHSDA 
DLVRGSDGWQ IVPEMSPDDG EPVIEKHYGD AFEDTDLEQV LTDSGVGRLV VVGAETDACV
RSTLHGAFTR GYDVALVGDA HTAGDKTQWG APPVEAVIAH TNLYWSYQAA PGRTAAVATA
AEIDLE