| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_4917 |
|---|
| Symbol | |
|---|
| ID | 4648850 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 5268248 |
|---|
| End bp | 5269168 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639808388 |
|---|
| Product | Ku domain-containing protein |
|---|
| Protein accession | YP_955696 |
|---|
| Protein GI | 120405867 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1273] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02772] Ku protein, prokaryotic |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.833698 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.128777 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGTCCA TCTGGAAGGG CTCGATCGCC TTCGGCCTGG TGAACGTCCC GGTCAAGGTC
TACAGCGCCA CCGAGGATCA CGACATCAAG TTCCACCAGG TGCACGACAA GGACAACGGC
CGCATCCGTT ACAAGCGGGT GTGCGAGGTG TGCGGTGAGG TCGTCGAATA CCGCGACATC
GCCAAGGCCT ACGAATCCGA CGACGGCCAG ACCGTCATCA TCACCGACGA CGACATCTCC
ACGCTGCCCG AGGAACGCAG CCGGGAGATC GAGGTGCTCG AGTTCGTTCC CGCCGGCGAC
CTCGACCCGC TGATGTACGA CCGCTCGTAC TTCCTGGAGC CCGACGGGAA GTCGTCGAAG
TCGTACGTGT TGCTGGCGAA GACGTTGATG GACACCGATC GGGTCGCGAT CGTGAACTTC
GCGCTGCGCA ACAAGACCCG GCTGGCGGCG CTGCGGGTCA AGGATTTCAG CAAGCGCGAC
GTGATGATGA TCCACACGCT GCTGTGGCCC GACGAGATCC GCGACCCCGA TTTCCCGGTG
CTCGACAAGA AGGTGGACGT CAAGCCCGCC GAGCTGAAGA TGGCCAGCCA GGTCGTCGAT
TCGATGACCG ACGACTTCAA CCCGGACCGC TACCACGACG ACTACCAGGA ACAGCTGCAC
GAGCTGATCC AGGCGAAACT CGAAGGCGGC GAAGCGTTCA CCACCGAGGA GCAGCCGCAG
GAGCTCGACG AGACCGAGGA CGTCTCCGAT CTGCTGGCCA AGCTCGAGGC CAGTGTGAAG
GCCCGCAAGG CGCAGGGCAC GCAGAAAGAC GAGCCTGCGG CCGAGAAACC GGCGGCCAAG
AAGCCGGCGG CCAAGAAGTC TCCCGCGAAG AAGACCGCGG CGAAGAAAGC ACCGGCGAAA
AAGGCACCGG CGAAGAAGTA A
|
|---|
| Protein sequence | MRSIWKGSIA FGLVNVPVKV YSATEDHDIK FHQVHDKDNG RIRYKRVCEV CGEVVEYRDI
AKAYESDDGQ TVIITDDDIS TLPEERSREI EVLEFVPAGD LDPLMYDRSY FLEPDGKSSK
SYVLLAKTLM DTDRVAIVNF ALRNKTRLAA LRVKDFSKRD VMMIHTLLWP DEIRDPDFPV
LDKKVDVKPA ELKMASQVVD SMTDDFNPDR YHDDYQEQLH ELIQAKLEGG EAFTTEEQPQ
ELDETEDVSD LLAKLEASVK ARKAQGTQKD EPAAEKPAAK KPAAKKSPAK KTAAKKAPAK
KAPAKK
|
|---|
| |