| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_4892 |
|---|
| Symbol | |
|---|
| ID | 4648825 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 5238852 |
|---|
| End bp | 5239508 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639808363 |
|---|
| Product | 3-oxoacid CoA-transferase, B subunit |
|---|
| Protein accession | YP_955671 |
|---|
| Protein GI | 120405842 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
|---|
| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGA CCTTCACAAC CGGCTGGACC CGCAACCAGA TCGCGGCCCG CGCGGCCGCC
GAGATGATCG ACGGGCAGTA CGTCGACCTG GGCATCGGAT TGCCCACCCT GATCCCTGGT
CATCTCAGCC CCGGGGTGCG GGTAATCCTG CACTCGGAGA ACGGGATTCT GGGCACCGGT
GGATATCCGG ACGAGGATTC GGTCGACGCC GACCTCATCA ATGCGGGCAA GGAGACCGTC
ACCGTCAACC GCGGCGCCGC CTTCTTCGAC TCCGCGACCT CGTTCGGGAT GATCCGCGGA
GGCCACATTG ATGCAGCCGT TCTTGGCGCT ATGCAGGTGT CACGCAACGG AGATCTGGCG
AACTGGATGG TGCCCGGCAA GATGGTCAAA GGAATGGGCG GTGCGATGGA TCTGGTCCAT
GGCGCAGCGC GTGTCATCGT CGTGATGGAA CACACCGACC GCAGTGGCGC ACCCAAGATC
GTCGACGCGT GCACGTTGCC CCTGACCGGA CAGGGTGTCG TCGACCGGAT CATCACGAAT
CTGTGCGTCA TCGATGTACC CGGAGACGGC ACCTTGGTGT TGCGCGAACT GGCTCCCGGC
GTCACCGTCG ACGACGTCGT CGCCGCGACC GGCGCCGAGT TGACGGTGGC ACTGTGA
|
|---|
| Protein sequence | MTATFTTGWT RNQIAARAAA EMIDGQYVDL GIGLPTLIPG HLSPGVRVIL HSENGILGTG
GYPDEDSVDA DLINAGKETV TVNRGAAFFD SATSFGMIRG GHIDAAVLGA MQVSRNGDLA
NWMVPGKMVK GMGGAMDLVH GAARVIVVME HTDRSGAPKI VDACTLPLTG QGVVDRIITN
LCVIDVPGDG TLVLRELAPG VTVDDVVAAT GAELTVAL
|
|---|
| |