Gene Mvan_4838 details

Gene Information

• Locus tag: Mvan_4838
• Symbol: mscL
• ID: 4646404
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycobacterium vanbaalenii PYR-1
• Kingdom: Bacteria
• Replicon accession: NC_008726
• Strand: +
• Start bp: 5175028
• End bp: 5175462
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 639808309
• Product: large-conductance mechanosensitive channel
• Protein accession: YP_955617
• Protein GI: 120405788
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 23
• Fosmid unclonability p-value: 0.619813
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTTGAAGG GGTTCAAAGA GTTCATCTCG CGAGGAAATG TCATCGATCT TGCGGTCGCG 
GTTGTCATCG GCGCCGCGTT CACCGGACTG GTGACCGCGT TCACCGAGAA TGTCATCCAG 
CCGCTGATCG ACCGGATCGG TGCGGGTCCT GACGCGGAGT ACGGAATCCT GCGAATTCCG 
TTGGGTGGGG ATCAGTTCGT CGACCTGAAC GCGGTGCTGT CGGCCGCCGT CAACTTCCTC 
ATCGTGGCCG CGGTCATCTA CTTCGTCATC GTCGTGCCGT TCAAGAAGCT CAAGGAGCGG 
GACAAGAAGG TCGAGTCGAC GGAGACCGAG CTGACGCTTC TGACCGAAAT CCGCGATCTT 
CTGCGCGACA ACGCCGCCGA CGCTGCGACG GGCCGACACG GCGGTACCGG CCCCCAGTCC 
CACGCCGACG AATGA 

 

Protein sequence

MLKGFKEFIS RGNVIDLAVA VVIGAAFTGL VTAFTENVIQ PLIDRIGAGP DAEYGILRIP 
LGGDQFVDLN AVLSAAVNFL IVAAVIYFVI VVPFKKLKER DKKVESTETE LTLLTEIRDL 
LRDNAADAAT GRHGGTGPQS HADE