| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_4817 |
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| Symbol | |
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| ID | 4646907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | - |
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| Start bp | 5157523 |
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| End bp | 5158344 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639808287 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_955596 |
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| Protein GI | 120405767 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.130348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.928656 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGGC CGCCGCTGAC CAAGGACACC AGACTGTGCA TCTCGCTGGC GGGTCGCCCT
AGCAACATCG GCACCCGGTT CCACAACCAT CTCTACGAGG TGTTGGGTCT GGACTTCATC
TACAAGGCGT TCACCACCAC CGACATCGTC GCGGCCATCG GTGGCGTGCG CGCACTCGGC
ATCCGCGGGT GCTCGGTGTC CATGCCCTTC AAGGAGGATG TGCTGCACCT GGTCGATCAT
GTCGAGGCTT CGGCGCAAGC CATCGAATCC GTGAACACGA TCGTCAACGA TGACGGCCGA
CTCACCGCAT CCAACACCGA TTACCTTGCG GTGCAACAAC TCATCGGAGA ACACGGGCTC
GACCCTGAGG ACACCGTGAT GATCCGCGGC AGCGGAGGCA TGGCGAAGGC GGTCGGTGCC
GCGTTCGCCG GAGCCGGTTT CCGCACCGGC TTCGTGGTGG CCCGCAACCC CGAAAGCGGT
CACGCGCTTG CCGACCGGCT CGGCTACACC TACGTCGCCG ACGTCGGCAC CGTCACCGCG
CCGATCATCG TCAACGTGAC ACCCATCGGC ATGGCGGGTG CACCCGAACA ACGCGAACTG
GCGTTCGGCG CGGCCGCGAT CGCCGCGGCC GACACCGTCT TCGACGTGGT GGCGTTACCG
TCCGAGACAC CGCTGATCAA GGCGGCCCGG GCGGCGGGGG CGCAGGTGAT CACCGGCGCG
CAGGTGATCG CGCTGCAGGC CGCCGAACAG TTCGAGCGCT ACACCGGAGT GCGTCCGACC
CCTGAACAGA TCGCCGAAGC GTCCGCGCTG TCGCGGGCCT GA
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| Protein sequence | MTRPPLTKDT RLCISLAGRP SNIGTRFHNH LYEVLGLDFI YKAFTTTDIV AAIGGVRALG
IRGCSVSMPF KEDVLHLVDH VEASAQAIES VNTIVNDDGR LTASNTDYLA VQQLIGEHGL
DPEDTVMIRG SGGMAKAVGA AFAGAGFRTG FVVARNPESG HALADRLGYT YVADVGTVTA
PIIVNVTPIG MAGAPEQREL AFGAAAIAAA DTVFDVVALP SETPLIKAAR AAGAQVITGA
QVIALQAAEQ FERYTGVRPT PEQIAEASAL SRA
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