Gene Mvan_4806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_4806 
Symbol 
ID4646096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5146640 
End bp5147521 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content69% 
IMG OID639808276 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_955585 
Protein GI120405756 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAAC ACGCCGACCG GTTCACCCAT CTGCGCCCGC TGCTGTTCAC GATCGCCTAC 
GAGATCCTGG GCAGCGCAAC CGAATCCGAC GACGTGCTGC AGGAGAGCTA TCTGCGCTGG
GCCGAGGTCG ACCTGGCAGC AGTGACCGAC ACCAAGGCCT ACCTGGCCCG GCTCGTCACC
CGGCAGGCCC TCAACGCGCT GCGGGCACAG TCCCGCCGCC GCGAGGACTA CGTGGGCCCG
TGGTTGCCCG AACCGCTTCT GACCGAGGCG GATCCGTCCG CGGATGTGGT GCTGGCCGAA
TCGGTGTCGA TGGCAATGCT GGTGGTGCTG GAGACGCTGA GTCCCGACGA ACGTGCGGTC
TTCGTGCTGC GGGAGGTGTT CGGGTTCGGG CACGACGAGA TCGCCGCGAC GCTCGGAAAG
TCGACGGAAG CGGTGCGTCA GACGGCGCAC CGCGCCCGCG CGCATGTGCA GTCCCGGCGC
AAACGCTTCG AGCCCGTCGA CCCGAAGGTG TCCACCGAGA TCACGACCCG GTTCTTCACC
GCCGCGGCCA CCGGCGACCT GGACGGGCTG ATGGCGATGC TGGCCCCCGA CGTGGTGTGG
ACGGCCGACA GCGACGGCAA GGTCAGCGCG GCGCGCAGGC CGGTGGCGGG CGCCGACCGG
GTGGCCAGGT TGATCATGGG CTTCGTCCGA CAGGCCGGCG CCGACGGCAG GGTCGAGCCC
GCGGTCTACA ACAGCGCGCC GGCCCTGGTG CTCTACCTCG GCGACAACCT GGAGGGTGTG
GTGACCTTCG AGGTGGTCGA CGGCCGGATC ACCAACTTCT ACGCGATGCG CAACCCGGAG
AAGTTGGCGG GTGTGAAGGT GCCGCGACAG ATCAGCCGAT AA
 
Protein sequence
MSEHADRFTH LRPLLFTIAY EILGSATESD DVLQESYLRW AEVDLAAVTD TKAYLARLVT 
RQALNALRAQ SRRREDYVGP WLPEPLLTEA DPSADVVLAE SVSMAMLVVL ETLSPDERAV
FVLREVFGFG HDEIAATLGK STEAVRQTAH RARAHVQSRR KRFEPVDPKV STEITTRFFT
AAATGDLDGL MAMLAPDVVW TADSDGKVSA ARRPVAGADR VARLIMGFVR QAGADGRVEP
AVYNSAPALV LYLGDNLEGV VTFEVVDGRI TNFYAMRNPE KLAGVKVPRQ ISR