Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_4806 |
Symbol | |
ID | 4646096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 5146640 |
End bp | 5147521 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639808276 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_955585 |
Protein GI | 120405756 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGAAC ACGCCGACCG GTTCACCCAT CTGCGCCCGC TGCTGTTCAC GATCGCCTAC GAGATCCTGG GCAGCGCAAC CGAATCCGAC GACGTGCTGC AGGAGAGCTA TCTGCGCTGG GCCGAGGTCG ACCTGGCAGC AGTGACCGAC ACCAAGGCCT ACCTGGCCCG GCTCGTCACC CGGCAGGCCC TCAACGCGCT GCGGGCACAG TCCCGCCGCC GCGAGGACTA CGTGGGCCCG TGGTTGCCCG AACCGCTTCT GACCGAGGCG GATCCGTCCG CGGATGTGGT GCTGGCCGAA TCGGTGTCGA TGGCAATGCT GGTGGTGCTG GAGACGCTGA GTCCCGACGA ACGTGCGGTC TTCGTGCTGC GGGAGGTGTT CGGGTTCGGG CACGACGAGA TCGCCGCGAC GCTCGGAAAG TCGACGGAAG CGGTGCGTCA GACGGCGCAC CGCGCCCGCG CGCATGTGCA GTCCCGGCGC AAACGCTTCG AGCCCGTCGA CCCGAAGGTG TCCACCGAGA TCACGACCCG GTTCTTCACC GCCGCGGCCA CCGGCGACCT GGACGGGCTG ATGGCGATGC TGGCCCCCGA CGTGGTGTGG ACGGCCGACA GCGACGGCAA GGTCAGCGCG GCGCGCAGGC CGGTGGCGGG CGCCGACCGG GTGGCCAGGT TGATCATGGG CTTCGTCCGA CAGGCCGGCG CCGACGGCAG GGTCGAGCCC GCGGTCTACA ACAGCGCGCC GGCCCTGGTG CTCTACCTCG GCGACAACCT GGAGGGTGTG GTGACCTTCG AGGTGGTCGA CGGCCGGATC ACCAACTTCT ACGCGATGCG CAACCCGGAG AAGTTGGCGG GTGTGAAGGT GCCGCGACAG ATCAGCCGAT AA
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Protein sequence | MSEHADRFTH LRPLLFTIAY EILGSATESD DVLQESYLRW AEVDLAAVTD TKAYLARLVT RQALNALRAQ SRRREDYVGP WLPEPLLTEA DPSADVVLAE SVSMAMLVVL ETLSPDERAV FVLREVFGFG HDEIAATLGK STEAVRQTAH RARAHVQSRR KRFEPVDPKV STEITTRFFT AAATGDLDGL MAMLAPDVVW TADSDGKVSA ARRPVAGADR VARLIMGFVR QAGADGRVEP AVYNSAPALV LYLGDNLEGV VTFEVVDGRI TNFYAMRNPE KLAGVKVPRQ ISR
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