Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_4798 |
Symbol | |
ID | 4646088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 5136458 |
End bp | 5138092 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639808268 |
Product | long-chain-fatty-acid--CoA ligase |
Protein accession | YP_955577 |
Protein GI | 120405748 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.966218 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCAGAT TCACCGAGAA GATGTACCGC AGTGCCCATA CCACCGGCAG GGGCATGGTC ACCGGAGAGC CCTACGAGCC GGTTCGTCAC ACCTGGGGTG AGGTGCACGA GCGGGCGAAG CGCATCGCCG GCGGACTGGC CGCGGCCGGC GTCGGCCTCG GCGACGCGGT CGGTGTGCTC GCGGGCTTCC CGGTCGAGAT CGCGCCCACC GCGCAGGGTC TGTGGATGCG CGGCGCGAGC CTGACGATGC TGCACCAGCC GACGCCGCGC ACCGACCTCG TGGTCTGGGC CGAGGACACC ATGAACGTCA TCGGCATGAT CGAGGCCAAG GCCGTCATCG TGTCCGAGCC GTTCCTGGTG GCGATCCCGG TGCTGGAGGA AAAGGGCATC AAGGTCCTCA CCGTGACGGA TCTGCTGGCC GCCGACCCCA TCGAGCCCAT CGAGGTCGGC GAAGACGATC TGGCGCTGAT GCAGTTGACG AGCGGATCCA CCGGGTCACC CAAAGCCGTG CAGATCACGC ACCGCAACAT CTACTCCAAC GCCGAGGCGA TGTTCATCGG CGCACAGTAC GACGTCGAGA AGGACGTCAT GGTCAGCTGG CTGCCGTGCT TCCACGACAT GGGCATGGTC GGCTTCCTGA CCATCCCGAT GTACTTCGGC GCCGAACTGG TCAAGGTCAC GCCGCTGGAC TTCCTGCGCG ACACCCTGCT GTGGGCCAAG CTGATCGACA AGTACAAGGG CACCATGACC GCGGCGCCGA ACTTCGCTTA CGCGCTGTTC GCCAAGCGGC TGCGCCGTCA GGCCAAGCCC GGCGAGTTCG ACCTGTCCAC GCTGCGCTTC GCGTTGTCCG GCGCCGAGCC CGTGGAACCC GCAGACGTAG AGGATCTGCT GGACGCCGGC AAGCCGTTCG GTCTCGACCC CGGCGCGATC CTGCCCGCCT ACGGCATGGC CGAGACCACG CTGGCCGTGT CGTTCTCACC CTGCGGTGCG GGCCTGACGG TCGACGAGGT CGACGCCGAC CTGCTGGCGG CGCTGCGCCG CGCGGTCCCG GCGACCAAGG GCCACACCAA GCGTCTCGCC GAGCTCGGCC CGCTGCTGAC CGACCTCGAG GCCCGGGTCA TCGACGACCA CGGCAATGTC ATGCCGCCCC GCGGCGTCGG CGTGATCGAG CTGCGCGGCG AGTGCGTGAC GCCCGGATAC ATGACCATGG GCGGCTTCAT TCCTGCTCAG GACGAACACG GCTGGTACGA CACCGGCGAC CTCGGCTACA TCACCGAGGA GGGCAACGTG GTGGTCTGCG GCCGCGTCAA GGACGTCATC ATCATGGCCG GCCGCAACAT CTACCCGACG GACATCGAAC GTGCGGCGGG CCGCGTGGAA GGTGTGCGTC CGGGCTGTGC CGTCGCGGTG CGGCTGGATG CCGGCCATTC CCGCGAGACG TTCGCCGTCG CCGTCGAGTC CAACAACTGG CAGGACCCGG CGGAGGTACG CCGCATCGAG CACCAGGTGG CCCATGAGGT CGTCGCGGAG GTCGACATGC GTCCCCGCAA CGTCGTCGTG CTCGGCCCGG GCAGCATCCC CAAGACGTCG TCCGGCAAGC TGCGCCGCTC GAACTCGGTC TCCCTGGTCA CCTAG
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Protein sequence | MSRFTEKMYR SAHTTGRGMV TGEPYEPVRH TWGEVHERAK RIAGGLAAAG VGLGDAVGVL AGFPVEIAPT AQGLWMRGAS LTMLHQPTPR TDLVVWAEDT MNVIGMIEAK AVIVSEPFLV AIPVLEEKGI KVLTVTDLLA ADPIEPIEVG EDDLALMQLT SGSTGSPKAV QITHRNIYSN AEAMFIGAQY DVEKDVMVSW LPCFHDMGMV GFLTIPMYFG AELVKVTPLD FLRDTLLWAK LIDKYKGTMT AAPNFAYALF AKRLRRQAKP GEFDLSTLRF ALSGAEPVEP ADVEDLLDAG KPFGLDPGAI LPAYGMAETT LAVSFSPCGA GLTVDEVDAD LLAALRRAVP ATKGHTKRLA ELGPLLTDLE ARVIDDHGNV MPPRGVGVIE LRGECVTPGY MTMGGFIPAQ DEHGWYDTGD LGYITEEGNV VVCGRVKDVI IMAGRNIYPT DIERAAGRVE GVRPGCAVAV RLDAGHSRET FAVAVESNNW QDPAEVRRIE HQVAHEVVAE VDMRPRNVVV LGPGSIPKTS SGKLRRSNSV SLVT
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