Gene Mvan_4792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_4792 
Symbol 
ID4646082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5131518 
End bp5132072 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content65% 
IMG OID639808262 
ProductTetR family transcriptional regulator 
Protein accessionYP_955571 
Protein GI120405742 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.165855 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.419651 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGGCTG AGGACCCGCG TCAGCGCGCC ATCGACGCGG CGGTTGAACT GTTCCACCGA 
GAGGGCTTCG GGGCCGTCGG CATCGACCGT CTGACCACGT CGATCGGAAT GTCGAAACGC
ACGCTGTACA AGTACTTCGA CTCGAAGGAC GATCTGCTTC TCGCGGTGCT GGACAGCTGC
GAAGGCATGG CGCTTCGCGA CTTACCGGAT GAGGATGATG ATTCGTCTCC GCGCGACCGG
ATCCTCGCGG TGTTCGACGC GCAGGCGAAG TACTGCACCG ACCCGGATTT CGCCGGCTGT
TTCTTCGTCA ACATCGCTAC GGAATTCCGC GATCCTGACC ATCGCGCGGT CCGTATCGCG
GCCGACCACA AAGCGAAGCT GACCCAATTC CTGGTTCGGC AGGCCCGCCT GGCCGGGGTG
GCGGCTCCCG ACGATCTCGC CGAACAACTC ACCGTCCTGC ACACCGGTGC CGCCGATTAC
GCCCTGCTCT ACGGCCACTA CCCGGATTCG ACCAGGACCG CAGTGGCAGC GTTGCTCACC
GCCGCGGGTC TCTGA
 
Protein sequence
MPAEDPRQRA IDAAVELFHR EGFGAVGIDR LTTSIGMSKR TLYKYFDSKD DLLLAVLDSC 
EGMALRDLPD EDDDSSPRDR ILAVFDAQAK YCTDPDFAGC FFVNIATEFR DPDHRAVRIA
ADHKAKLTQF LVRQARLAGV AAPDDLAEQL TVLHTGAADY ALLYGHYPDS TRTAVAALLT
AAGL