Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_4651 |
Symbol | |
ID | 4647016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 4989438 |
End bp | 4990181 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639808121 |
Product | polysaccharide deacetylase |
Protein accession | YP_955432 |
Protein GI | 120405603 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.796578 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGAGCG GATCCGGCGC GCAATACGAC ACCCGGGGTG CTCGAGCGCG CCGGATCCGC TCGGCGGCGA TACTGCTGGG GCTTGTCGGC GGTTTCATCG CCGCCGTGCC AGCCCCCGCC GCGGCGGACA GCGTGGACTG CGCACGGGTC AAATGCGTGG CGTTGACGTT CGACGACGGG CCGGGGCCTT TCACCGACCG GTTGCTTCAG ACCCTGCGCG CCAACAACGC CGAGGCGACG TTCTTCCTGA TCGGCGACAA GGTGGCCGCC GATCCCGCCG CGGCGAGGCG CATCGTCGAT GCCGGTATGG AGATCGGCAA CCACACCTGG AGCCATCCCG ACTTGACGGC GATCCCGCCG CAGGAGCTTC CGGCCCAGTT GAGCAGGGCC ACCGAGGTAC TCGAACGGGC CACCGGCGAA CGGCCCACGC TGATGCGCCC GCCTTTCGGC GCGGTCGACG ACGCCGTGCT GGCCGCCGCG GGCAGCCAGG GGTTGGCGGT GGTCAACTGG GACGTCATCC CGCTCGACTG GGAGAACGAC ACCGACATCG CCGCCACCCG CGCGGCGCTG ACGGAGCAGA TTCGGCCGAA CTCGGTGGTA CTGCTACACG ACACCTTCGC GTCGACAGTC GACTTGATGG CCGAGTTCGT CCCGGTGCTC CGGGCGAACG GCTACCACCT GGTCACCGTC TCGCAGATGA TCGGTCCGCG ACCGCCCGGC AGCCTCTACG GGACTCCGCC CTGA
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Protein sequence | MTSGSGAQYD TRGARARRIR SAAILLGLVG GFIAAVPAPA AADSVDCARV KCVALTFDDG PGPFTDRLLQ TLRANNAEAT FFLIGDKVAA DPAAARRIVD AGMEIGNHTW SHPDLTAIPP QELPAQLSRA TEVLERATGE RPTLMRPPFG AVDDAVLAAA GSQGLAVVNW DVIPLDWEND TDIAATRAAL TEQIRPNSVV LLHDTFASTV DLMAEFVPVL RANGYHLVTV SQMIGPRPPG SLYGTPP
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