| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_4601 |
|---|
| Symbol | |
|---|
| ID | 4646942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 4941173 |
|---|
| End bp | 4942537 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639808071 |
|---|
| Product | virulence factor Mce family protein |
|---|
| Protein accession | YP_955382 |
|---|
| Protein GI | 120405553 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0155003 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGCGCA CCCTCCGGAT CCTGCTGATC GCCTCACTCT CCGTGATCCT CGTGGGCGGC
GTGGTTGTGC TGTTGCGCAC CACCGAAGCG ATCAACCGCA CACATGCCGT CGCGTACTTC
GAGAACAGCA ACGGCATCTA TGCAGGCGAC GCTGTCAGCA TCGTCGGTGT GCCCGTCGGC
AAGATCGAGT CCATCGAGCC GCAGCCCGAG TCGGTCAAGG TCTCCTTCTG GTACGACAGC
AAGTACAAGG TCCCGGCCGA CGCGAAGGCG GTGATCTTGT CGCCCACGCT GGTGACGGCC
CGGACCATTC AGCTCACTCC CGCCTATACG GGTGGGCCGG TGATGGAGAA CGACGCGGTC
ATCCCACGGG AACGCACCGC GGTCCCGGTG GAGTGGGACG AGGTTCGCCA GCAACTGGCG
AAGCTGGCCG ACACCTTGCA GCCGACCGAG CCCGGCGGCG TGAGCCCGCT CGGCTCCGTC
ATCAACACCA CCGCCGACAA TCTGCGTGGC GAGGGTGCCA ACATCCGGGA CACCGTCATC
AAGCTGTCGC AGGCCATTTC GGCCCTCGGT GACAACAGCA CCAACATCTT CTCCACGGTC
AAGAACCTGG CCACCCTGGT GTCGGCGCTG CAGGACAGCA CCAACCTGAT GCGGCAGCTC
AACCAGAACC TCGCGAGCGT GACCGGCCTA CTCGCCAACG ATCCCGACGA GGTGGCCAAC
GCGGTCCGCG ACCTCGACAA GGCCGTCGGC GAGGTCCAGA CGTTCGTGGC CGACAATCGC
GAATCGCTGG GCACCACCTC GGACAAGCTG GCGGGGGTGA CCCAGGCGTT GACGGACAGT
CTCGCCGATG TGAAGCAGTT CCTGCACGTG GCTCCCAACA CCTTGCAGAA CTACGTCAAC
ATCTGGCAAC CCGCCCAGGG TGCGGTCAGC AGCGTGCCGA TGATCAACAA CTTCGCCGAT
CCGGTCTCCT TCCTGTGCGG CGCGGTTCAG GCGGCGTCAC GCCTGGGCGC CGAGGAGTCG
GCGAAGTTGT GCGTGCAATA CATGGCCCCG ATCATCAAGA ACCGGCAGTA CAACTTCCTG
CCGCTCGCGC AGAACGTCTT CGTCGGTGCC ACCACCCGGC CGAATGAGCT CACCTACAGC
GAGGACTGGC TGCGGCCCGA TTACATTCCG CCGCAACCAG GTTCGGCGGC GCCGCCGCCA
CCCGCAGGTG CGCCGCAGCC CGCGGCAGGT GCGCCACAGC CACCGGCAGG TGCGCCGCTG
CCCCCGGCGC TGGGTCCGCT CTTGCCCGCG GAGGCGGTGC CCACCGCGCC CAACCCGGCT
GACGGCCTTC AGGGCCTGAT GGTGCCGGCT GGAGCGGGAT CATGA
|
|---|
| Protein sequence | MTRTLRILLI ASLSVILVGG VVVLLRTTEA INRTHAVAYF ENSNGIYAGD AVSIVGVPVG
KIESIEPQPE SVKVSFWYDS KYKVPADAKA VILSPTLVTA RTIQLTPAYT GGPVMENDAV
IPRERTAVPV EWDEVRQQLA KLADTLQPTE PGGVSPLGSV INTTADNLRG EGANIRDTVI
KLSQAISALG DNSTNIFSTV KNLATLVSAL QDSTNLMRQL NQNLASVTGL LANDPDEVAN
AVRDLDKAVG EVQTFVADNR ESLGTTSDKL AGVTQALTDS LADVKQFLHV APNTLQNYVN
IWQPAQGAVS SVPMINNFAD PVSFLCGAVQ AASRLGAEES AKLCVQYMAP IIKNRQYNFL
PLAQNVFVGA TTRPNELTYS EDWLRPDYIP PQPGSAAPPP PAGAPQPAAG APQPPAGAPL
PPALGPLLPA EAVPTAPNPA DGLQGLMVPA GAGS
|
|---|
| |