Gene Mvan_4583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_4583 
Symbol 
ID4646924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4921866 
End bp4923014 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content71% 
IMG OID639808053 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_955364 
Protein GI120405535 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.476783 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.268513 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACCCG TGCGCACACT GGTCGCCGGC GCCACCGGCT ACATCGGCTC TCGGCTCGTC 
ACCGCGTTGC TCCACGACGG TCATCAGGTC GTCGCCGCCA GCCGCGACCC CGCGCGCTTG
ACGGAGTTCG GCTGGTACAA GGACGTTTCA ACGGTCACCC TCGATGCGCA CGACGAGATC
TCGGCGCGGC AGGCGTTCAC CGACGCCGGG CCGGTCGACG TGGTGTACTA CCTCGTGCAC
GGCATCGGGC AGCCCGGGTT CCGGGAAGCC GACAATCGGG CGGCGGCCAA CGTCGCCTCG
GCGGCCAAGG CGGCAGGGGT ACGCCGCATC GTCTATCTGG GCGGGTTCGT CCCCGACGAC
GACTCGCTGT CCGAGCATCT GACCAGCCGC GCCGAGGTTG CTGCCGCGCT GACCGTCGAC
GGCGGCCCGG ATGTGGTGTG GCTCGGCGCC GCGATCGTCA TCGGCGCGGG CTCGACGTCG
TTCGAGATGC TGCGTTACGT CGGCGACCGG TTCCTACTGT TGCCCATGCC GGAGTGGTCG
GCTAATCCCA TCGACCCGAT CGCCATCAGC GACGCACTGC ACTATCTCGT CGCGGCGGCC
GATGCCGACA CGGTTCCGCC CGGCGCCTAC GACATCAGCG GACCGGAGAC CACCACCTAC
GGTGACCTGC TGCGTACCTA CGCGCGCGTC GCCGGGGTCT GGCGCGCGCC GGTCGCGGTG
TACGGCGTCG ACATCGCGAC GGTGTCGAAG CTGACCGGGG TCGTGCTCCC CGTGCCGGCC
GGTTTGGCCT CCGATCTTGT TGAATCACTT GACTATCCGA TGATGGCGTC GGCGGAGGGA
CTGCGCGGCC GTGTCCCCGA TCCGCCAGGT GGCCTGGTCG GCGTCGAGGA CGCGATCCGG
CGGGCCGCGG CCAGTCCGGC GCGTCGGCCC GTCGACGAGC TGACCGATCC GCACCACCTC
GCCGACACCG ATCCCGACTG GGCCGGCGGC GACGCGCTGC GGCTGCGCCA GTTGGCCGGC
GCGGTGACGC CGCCCGTCGC CCGCCCGTTC CTCGGTCTCA TCGGGTTCGT TCCCGGACCC
GTCGCGGCGG CGGTACGCAC CGGGCTGGAC GCCGTGATCG GGCTGGTGCC CAAGGTGATT
CCGGCATGA
 
Protein sequence
MKPVRTLVAG ATGYIGSRLV TALLHDGHQV VAASRDPARL TEFGWYKDVS TVTLDAHDEI 
SARQAFTDAG PVDVVYYLVH GIGQPGFREA DNRAAANVAS AAKAAGVRRI VYLGGFVPDD
DSLSEHLTSR AEVAAALTVD GGPDVVWLGA AIVIGAGSTS FEMLRYVGDR FLLLPMPEWS
ANPIDPIAIS DALHYLVAAA DADTVPPGAY DISGPETTTY GDLLRTYARV AGVWRAPVAV
YGVDIATVSK LTGVVLPVPA GLASDLVESL DYPMMASAEG LRGRVPDPPG GLVGVEDAIR
RAAASPARRP VDELTDPHHL ADTDPDWAGG DALRLRQLAG AVTPPVARPF LGLIGFVPGP
VAAAVRTGLD AVIGLVPKVI PA