Gene Mvan_4562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_4562 
Symbol 
ID4649026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4901337 
End bp4903079 
Gene Length1743 bp 
Protein Length580 aa 
Translation table11 
GC content71% 
IMG OID639808032 
ProductNa+/solute symporter 
Protein accessionYP_955343 
Protein GI120405514 
COG category[R] General function prediction only 
COG ID[COG4147] Predicted symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCT CCCCGCTGAC GGCGGCGGCG CTGCTGGCCG CGGCCGTGGC CACCATCGCG 
ATCGGCGCCT ACGGGGTCCG GTTCTCCCGC ACGACATCCG ACTTCCTGGT CGCCTCGCGT
ACCGTGGGCT CGCGGTGGAA CGCGGCCGCG ATCTCCGGTG AATACCTCTC GGCGGCATCA
TTTCTCGGGG TGGCCGGGCT GATCGCCAAA TACGGTGCCG ACGCGCTGTG GTACCCCGTC
GGGTTCACCG CAGGCTATCT CGGACTGCTG CTGTTCGTCG CGGCACCGCT GCGCCGCTCG
GGGGCCTACA CCGTGCCCGA TTTCGCCGAG TTCCGGCTCG GCTCGCCGCG CCTGCGCAAG
GTCGCGATGC TGGTGGTCGT CGTGATCTGC ATCTTCTATC TGGTCCCCCA ATATCAGGGC
GCGGGCCTTG CGCTGAAGAC TCTGCTGGGC GTCCCGGTGT GGCTCGGCCC GCTGGCCGTC
GGCGCCATCG TCATCATGAA CGTCGTCGCC GGGGGGATGC GCTCGATCAC GTTCGTGCAG
GCATTCCAGT ACTGGCTCAA GCTGACCGCG GTCGCCATCC CCGCGCTGGC GCTGGCCGGG
CTGTTCCTCA CCGACCGCGG CGGTGAGCTC GGCGGCCCGC TGCCGCCGAC GGTGCAGCAG
ATCACCACCG TCGAGATCGA GACCGACGTC GTCGTGCAGG TCGCCGAACC GGCCGGGATC
ACGGTGACGG GCACGCTGGA CGACCGGCAG GTCGACGGTG CGAAGATCGG ACCGGCAGGT
GACCACACCT TGGGCGCGGG CAGCACCCTG ACCTTGTCCG CGGGTGCGGC CACACCTGTC
GTGGCGGGCA CGCCGAGCGC GGGCCGGGAC TGGATCTCCT CGGGCGGCGG ATTGGGTGGG
CGGCACCCGC TGTATCAGGT GCTGTCCATC ATGGTTGCGA CGTTCCTGGG CACCATGGGA
CTCCCGCATG TGCTGGTCCG CTTCTACACC AACCCCGACG GGCGGGCGGC GCGGCGTACG
GCGCTGGCGG TCATCGCGCT GCTCTCGCTG TTCTACCTGT TTCCGACGTT GCTCGGCGTG
TTCTCCCGGC TGTACGTTCC CCAGCTGCTG ATCACCGGAA CCGCCGACGC CGCAGTGCTG
TTGGCGCCCG GTTCGGTCAT CGCCGGGGTG GCCGGGCAGC TGCTCGCGGC GCTGGTGGCG
GCGGGGGCGA TCGCCGCGTT CCTGGCGACG TCGTCGGGCC TGCTGGTCAG TTTCGCCGGG
GCCCTGGCCA CCGATGTGCT GCCCGGGCGG GTCCGCGACT TCCGGGTGGC GGCCGTCATC
GGGGGCCTGA TTCCGATCCC GTTGGCGCTG GCGGCTTCCG GGGAACTGGA GCTGTCCCGC
AGCGTCGGAC TGGCGTTCGC GGTCGCGGCG TCGACGCTGT GCCCGCTGCT GGTGCTCGGC
ATCTGGTGGC GCGGGCTGAC CGCGACCGGT GCGATGGCAG GGCTTGCGGT CGGCGGTGTG
CTGTCCGGCG GGGCGGTCAC CGTCGCCGTC GCCGGCGGTA TCGACGAGAA CGTGCTCGGC
GGCTGGCCCA CCGTGCTGGT CGGCTACCCC GCCGCCGTCA GCGTGCCCCT GGCGTTCGCG
ACCATGCTGG CCGTCAGCCG CCTCACCCGC GCGACCGCGC CGCCCGACGT CGCGCAGACG
TTCGCGCGGA TGCACCTGCC GGAACATCTC GGAATGGGAA TCGAGCGCAT GCCACGGGCA
TGA
 
Protein sequence
MTGSPLTAAA LLAAAVATIA IGAYGVRFSR TTSDFLVASR TVGSRWNAAA ISGEYLSAAS 
FLGVAGLIAK YGADALWYPV GFTAGYLGLL LFVAAPLRRS GAYTVPDFAE FRLGSPRLRK
VAMLVVVVIC IFYLVPQYQG AGLALKTLLG VPVWLGPLAV GAIVIMNVVA GGMRSITFVQ
AFQYWLKLTA VAIPALALAG LFLTDRGGEL GGPLPPTVQQ ITTVEIETDV VVQVAEPAGI
TVTGTLDDRQ VDGAKIGPAG DHTLGAGSTL TLSAGAATPV VAGTPSAGRD WISSGGGLGG
RHPLYQVLSI MVATFLGTMG LPHVLVRFYT NPDGRAARRT ALAVIALLSL FYLFPTLLGV
FSRLYVPQLL ITGTADAAVL LAPGSVIAGV AGQLLAALVA AGAIAAFLAT SSGLLVSFAG
ALATDVLPGR VRDFRVAAVI GGLIPIPLAL AASGELELSR SVGLAFAVAA STLCPLLVLG
IWWRGLTATG AMAGLAVGGV LSGGAVTVAV AGGIDENVLG GWPTVLVGYP AAVSVPLAFA
TMLAVSRLTR ATAPPDVAQT FARMHLPEHL GMGIERMPRA