| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_4540 |
|---|
| Symbol | |
|---|
| ID | 4648751 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 4878964 |
|---|
| End bp | 4880868 |
|---|
| Gene Length | 1905 bp |
|---|
| Protein Length | 634 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639808010 |
|---|
| Product | GTP-binding protein TypA |
|---|
| Protein accession | YP_955321 |
|---|
| Protein GI | 120405492 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.362489 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATGCAC GCCCGGATTT CCGCAACGTC GCCATTGTGG CCCACGTCGA CCACGGCAAG
ACCACGCTGG TCGACGCGAT GCTGCGTCAG TCCGGTGCGC TGAGCCACCG TGGGGACGAC
GCGATCGAGC GCCTGATGGA TTCCGGTGAC CTGGAAAAGG AAAAGGGCAT CACCATCCTG
GCCAAGAACA CCGCGGTGCA TCGTCACCAC GCCGACGGCA GCATGACCGT CATCAACGTC
ATCGACACCC CGGGGCACGC CGACTTCGGC GGCGAGGTCG AGCGCGGGCT GTCCATGGTC
GACGGCGTCG TCCTGCTCGT CGACGCATCG GAGGGGCCAC TGCCGCAGAC GCGGTTCGTG
CTGCGTAAGG CCCTGGCCGC GCACCTGCCC GTCATCCTGG TCGTCAACAA GACCGACCGG
CCCGACGCGC GCATCGCCGA GGTCGTCGAA GAGAGTCACG ACCTGCTGCT CGACGTCGCC
TCCGACCTCG ACGAGGAAGC TCAGACCGCC GCCGAGAAGG CACTCGACCT GCCCACGCTG
TACGCCTCGG GACGTGCGGG CATCGCCAGC ACCGTCCAGC CCGCCAACGG CGAGAACCCC
GACGGCGAGA ATCTCGACCC GCTGTTCGAC GTGCTGCTCG AGCACATCCC GCCGCCCCAG
GGTGATCCGG AAGCCCCGCT GCAGGCGCTG GTCACCAACC TCGACGCGTC GGCGTTCCTG
GGCCGGCTGG CGCTGATCCG GATCTACAAG GGCCGGATCA AGAAGGGGCA GCAGGTCGCG
TGGATGCGCG AAGTCGACGG CCACCCCGTC ATCACGACCG CGAAGATCAC CGAGCTGCTG
GTCACCGAGG GCGTGGAGAG AACCGCCACC GACGAGGCCT TCGCCGGCGA CATCGTCGCG
GTGGCCGGCA TCCCGGAGAT CATGATCGGC GACACGCTGG CCGATCCCGA CCACGCGCAC
GCGCTGCCCC GCATCACCGT CGACGAGCCG GCCATCTCGG TGACCATCGG CACCAACACC
TCACCGTTGG CGGGCAAGGT GTCAGGCCAC AAGCTGACCG CGCGAATGGT CAAGAACCGC
CTGGACTCCG AACTCGTCGG CAACGTGTCG ATCAAGGTCG TCGACATCGG CCGCCCCGAC
GCGTGGGAGG TGCAGGGCCG CGGTGAGCTG GCGCTGGCCG TGCTCGTCGA GCAGATGCGC
CGCGAGGGCT TCGAGCTCAC GGTCGGCAAG CCGCAGGTGG TCACCCGGAC CGTCGACGGC
AAACTGCATG AACCGTTCGA GGCGATGACG ATCGACTGCC CCGAAGAGTT CGTCGGCGCC
ATCACCCAGC TGATGGCCGC CCGCAAGGGC CGCATGGAGG AGATGACCAA CCACGCCGCC
GGATGGGTGC GGATGGACTT CATCGTGCCC AGCCGCGGGC TGATCGGGTT CCGGACGGAC
TTCCTGACGC TGACCCGTGG CACCGGCATC GCCAACGCGG TGTTCGACGG CTACCGTCCG
TGGGCGGGCG AGATCCGCGC CCGGCACACC GGTTCGCTGG TGTCCGACCG CAGCGGCCAG
ATCACCCCGT TCGCGATGAT CCAGCTCGCC GACCGTGGCC AGTTCTTCGT CGAACCCGGC
CAGGAGACCT ACGAGGGCCA GGTCGTCGGG ATCAACCCGC GCGCCGAGGA TCTCGACATC
AACGTGACCC GCGAGAAGAA GCTGACCAAC ATGCGGTCCT CGACCGCCGA CGTGATGGAG
ACGCTGGCCC GCCCGCTGGA ACTCGACCTG GAGAAGGCGA TGGAGTTCTG CGCGGCCGAC
GAGTGCGTCG AGGTCACCCC GGAGATCGTG CGGGTGCGCA AGGTGGAGTT GACGGCCTCA
CTGCGGGCGC GGGCGAAGTC GCGCGCCAAA CAGGCCAACA ACTGA
|
|---|
| Protein sequence | MNARPDFRNV AIVAHVDHGK TTLVDAMLRQ SGALSHRGDD AIERLMDSGD LEKEKGITIL
AKNTAVHRHH ADGSMTVINV IDTPGHADFG GEVERGLSMV DGVVLLVDAS EGPLPQTRFV
LRKALAAHLP VILVVNKTDR PDARIAEVVE ESHDLLLDVA SDLDEEAQTA AEKALDLPTL
YASGRAGIAS TVQPANGENP DGENLDPLFD VLLEHIPPPQ GDPEAPLQAL VTNLDASAFL
GRLALIRIYK GRIKKGQQVA WMREVDGHPV ITTAKITELL VTEGVERTAT DEAFAGDIVA
VAGIPEIMIG DTLADPDHAH ALPRITVDEP AISVTIGTNT SPLAGKVSGH KLTARMVKNR
LDSELVGNVS IKVVDIGRPD AWEVQGRGEL ALAVLVEQMR REGFELTVGK PQVVTRTVDG
KLHEPFEAMT IDCPEEFVGA ITQLMAARKG RMEEMTNHAA GWVRMDFIVP SRGLIGFRTD
FLTLTRGTGI ANAVFDGYRP WAGEIRARHT GSLVSDRSGQ ITPFAMIQLA DRGQFFVEPG
QETYEGQVVG INPRAEDLDI NVTREKKLTN MRSSTADVME TLARPLELDL EKAMEFCAAD
ECVEVTPEIV RVRKVELTAS LRARAKSRAK QANN
|
|---|
| |