| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_4516 |
|---|
| Symbol | |
|---|
| ID | 4646833 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 4851801 |
|---|
| End bp | 4852814 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639807986 |
|---|
| Product | aminotransferase, class IV |
|---|
| Protein accession | YP_955297 |
|---|
| Protein GI | 120405468 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.108698 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.419651 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCATTG ACACCGGAAC CTCGAATCTC GTCGCCGTCG AACCCGGCGC CATCCGCGAG
GACACCCCGG CGGGCTCGGT GATCCAGTAC AGCGACTACG AGATCGACTA CTCCAGCCCG
TTCGCCGGCG GCGTGGCCTG GATCGAAGGT GAGTACCTGC CCGCCGAGGA CGCCAAGATC
TCGATCTTCG ACACCGGGTT CGGGCACTCT GACCTCACCT ACACCGTGGC CCACGTATGG
CACGGCAACA TCTTCCGCCT CGGTGACCAT CTCGACCGGC TGCTCGACGG TGCCCGCAAG
CTGCGCCTCG ATTCCGGCTA CACCAAAGAC GAACTCGCCG ACATCACCAA GAAGTGCGTG
TCCCTCTCAC AGCTGCGCGA GTCGTTCGTC AATCTGACCA TCACGCGTGG ATACGGAAAG
CGCAAGGGGG AGAAGGATCT CTCGAAACTG ACCCACCAGG TGTACATCTA TGCGATCCCG
TACCTGTGGG CGTTCCCGCC CGCCGAGCAG ATCTTCGGGA CCACCGCCGT CGTACCGCGC
CACGTGCGCC GTGCCGGCCG CAACACCGTC GACCCGACCA TCAAGAACTA CCAGTGGGGT
GATCTGACCG CGGCCAGCTT CGAGGCCAAG GACCGCGGCG CCCGCACCGC CATCCTGATG
GACGCAGACA ACTGCGTCGC GGAGGGACCG GGTTTCAACG TCTGCATCGT CAAGGACGGC
AAGCTCGCAT CTCCTTCGCG AAATGCGTTG CCCGGCATCA CCCGTAAGAC GGTGTTCGAG
ATCGCCGGAG CGATGGGCAT CGAGGCCGCG CTGCGCGACG TCACCAGCCA CGAACTGTAT
GACGCCGACG AGATCATGGC GGTCACCACC GCCGGCGGTG TGACACCGAT CAACACCCTC
GACGGTGTGC CCATCGGCGA CGGGGAGCCC GGCCCGGTGA CGGTGGCGAT CCGGGACCGC
TTCTGGGCGT TAATGGACGA GCCCGGGCCC CTGATCGAAG CGATCCAGTA CTGA
|
|---|
| Protein sequence | MGIDTGTSNL VAVEPGAIRE DTPAGSVIQY SDYEIDYSSP FAGGVAWIEG EYLPAEDAKI
SIFDTGFGHS DLTYTVAHVW HGNIFRLGDH LDRLLDGARK LRLDSGYTKD ELADITKKCV
SLSQLRESFV NLTITRGYGK RKGEKDLSKL THQVYIYAIP YLWAFPPAEQ IFGTTAVVPR
HVRRAGRNTV DPTIKNYQWG DLTAASFEAK DRGARTAILM DADNCVAEGP GFNVCIVKDG
KLASPSRNAL PGITRKTVFE IAGAMGIEAA LRDVTSHELY DADEIMAVTT AGGVTPINTL
DGVPIGDGEP GPVTVAIRDR FWALMDEPGP LIEAIQY
|
|---|
| |