Gene Mvan_4500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_4500 
Symbol 
ID4645539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4834832 
End bp4836454 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content70% 
IMG OID639807970 
Productputative ABC transporter membrane-spanning protein 
Protein accessionYP_955281 
Protein GI120405452 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3559] Putative exporter of polyketide antibiotics 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.949978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.795337 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA CCGCCGGGCT GCCGACCCGG GGCCGGCATG CGGCCCCGGC CGCGAGGTCA 
CCGTGGACGG GCACCGGTGA TCTGATCGGG CTGGCGTTGC GCCGCGACCG GGTCCGGCTG
TCCGTCTGGA TCGCCGCGCT CACGGCAATG ACGGCCTACG CTCCCGGTGC CATCAAGCTC
GCCTACCCGG AGGAGGCCCA GCGTCAGGCG CGGGTAGACC TGCTCAAGAC GCCCGCCGGG
ATGATGCTGG GCGGACCCAT GTTCGGCGGC AACGAGACCG ATCTGGGCGC GATGATGGCC
AACGAGTTGA TGCTCACGAT GATCATCGCC ACGTCGATCC TGGCCATTCT CACCGTGATC
CGGCACACCC GCGCCGAGGA GGAAAGCGGC GCCGCCGAAC TGGTGCTGGC TTCGGTGGTC
GGCCGATATG CCCGCACCAC TGCTGCGTTG ATCCTCGTGG CGGCCGTCAA CGTCGTGCTG
GCCGTGACGA CGACGGCGGC GATGGCCGCC GGCGGGTTCG GCGTCGTCGA CTCCGCCGCG
ATGTGCGTCG GGGTCACGGC GGTGGCCATG GTGTTCGGTG CCGTCGCCGC TGTCACCGCC
CAGATGTGGC GGGCGGCGCG CGCTGCGACG GGCGCGGCGA TGGCCACCCT CGCGCTGGCC
GCCCTGGTCC GCGGCATCGG AGACGTGATC GACAACTCGG GGAGCGTGCT GAGCTGGTTC
TCCCCCATCG CATGGGCCCA ACAGATGCGC CCCTTCGTCG AGCTGCGCTG GTGGCCGCTG
GCGCTCCTGT CGGCGTTGTC GCTGACGCTG GTCGCGATCG CCGCGGCCCT CGAAGTGCAG
CGCGAGTACG ACGACGCCAC CATCGTGTCC AGTGGAGAGA GCCCCAACGC CCGCCCGATC
CGCGGAGTGC TGGCCCTGCA TCTGAGGCTG CAGCGCGGGC AGACCCTCGG CTGGTCGGTC
GGTCTGTTCG CGGCCGGACT GGCCTTCGGT TCGATGACGA AGTCGCTGCT GGAGGCCGCA
CACGACAACG AGTTGCTGGC CCGCATCGTG TCGACCCAGG GTCTGGACGG CGTGTACACC
ACAATGACGC AGTTCCTCGC GGCCGCGGCG GGCGCATACG TGGTGTCCGC GGTGTTGCGG
GTGTTTGCCG ACGAGCAGTC CGGTCTCGGC GAAGCCGTGC TGGCCGGTGC GGTGTCACGA
CCGCGCTGGC TGTCCACGGC GGTGCTGTCG GCCGTTCTGG GGGCAAGCGT GCTGATGTTC
TTCGCGGGTC TGGGCAACGG TCTCGGCGCC GGGGTGACGT TGGGCGAACC GGCAACGGTG
CTCAGGCTGA CGGTGGCCGG GCTGGCTTTC GTGCCGGCAC TTGCGGTGCT GGCCGGGGTC
GCGGCGCTCG CCGTCGCGCT TCGCCAGAGT TGGATCGGTT GGCTGGCGGT GACTTTCGTT
GTCGCGTCGC TCTACCTCGG CGCACTGCTT CGACTGCCCG GCTGGCTGCT CGACCTGTCA
CCGGTGGCGC AGACCAGCTA CCCCGCCGAT GTCCCCGCCC TCGGCTGGTT TGTGATGTGC
TGTGCGGCAG CAGCTTTGAC CGTGTTTGCT GCCGTGAGGT ATCGACACCG CGACGCGGTC
TGA
 
Protein sequence
MSTTAGLPTR GRHAAPAARS PWTGTGDLIG LALRRDRVRL SVWIAALTAM TAYAPGAIKL 
AYPEEAQRQA RVDLLKTPAG MMLGGPMFGG NETDLGAMMA NELMLTMIIA TSILAILTVI
RHTRAEEESG AAELVLASVV GRYARTTAAL ILVAAVNVVL AVTTTAAMAA GGFGVVDSAA
MCVGVTAVAM VFGAVAAVTA QMWRAARAAT GAAMATLALA ALVRGIGDVI DNSGSVLSWF
SPIAWAQQMR PFVELRWWPL ALLSALSLTL VAIAAALEVQ REYDDATIVS SGESPNARPI
RGVLALHLRL QRGQTLGWSV GLFAAGLAFG SMTKSLLEAA HDNELLARIV STQGLDGVYT
TMTQFLAAAA GAYVVSAVLR VFADEQSGLG EAVLAGAVSR PRWLSTAVLS AVLGASVLMF
FAGLGNGLGA GVTLGEPATV LRLTVAGLAF VPALAVLAGV AALAVALRQS WIGWLAVTFV
VASLYLGALL RLPGWLLDLS PVAQTSYPAD VPALGWFVMC CAAAALTVFA AVRYRHRDAV