| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_4494 |
|---|
| Symbol | |
|---|
| ID | 4645533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 4829384 |
|---|
| End bp | 4830874 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639807964 |
|---|
| Product | peptidase S1 and S6, chymotrypsin/Hap |
|---|
| Protein accession | YP_955275 |
|---|
| Protein GI | 120405446 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.18457 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.102663 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGAATC TGGACCAGAC CGGTCGGGAA CGCCTCGAGC CGCGGCCGGT GTCGCGTCCG
CCGGTTGATC CGGCGGCCCA GCGCGCCTTC GGCCGGCCCA CCGGCGTGAA CGGCTCGTTC
CTGGGTGCCG ACCAGCATCG CGACCAAGGG GAGTACACCC CGAAGGATCA GGCGCCCGAT
CCGGTGCTCG CGGAGGCGTT CGGCCGTCCG TATCAGGGCG GCGACTCGCT GCAGCGCCAT
CCGACCGACG CCGGTGCCCT CGACGCCGAA CGCGACGGCG ATGCCGACGA GCTCGACGAC
CCGTGGCGCA ACCCGGGCGC CGCGGCCGCG CTGGGGACGC CCGCGCTCGC CCCGGCCGGC
CCCACCCAGG CCGCCGCGCC TTTGGGGAAG CTCGGGGTTC GGGACGTGTT ATTCGGCGGC
AAGGTGTCCT ACGTCGCCCT CGTGGTGCTC GGACTCGTCG CGCTCGTCAT CGGGGTGGCC
GGTGGCTGGG TGGGCCGCAC CACCGCCGAG GTGGTCTCGG CGTTCACCAC GTCGAAGGTC
ACATTGGAGA CCAGTGACAC CGGCGGCGCC GAATCTGAGG GGCAGTTCGC GAAAGTTGCT
GCCGCGGTTG CCGATTCGGT CGTGACGATC GAGGCGACCA GCAAGACGGA GGGTTCGCAG
GGTTCCGGTG TGGTGGTCGA TGGCCGCGGC TACATCGTCA CCAACAACCA CGTGATCTCC
GAGGCCGCCA CCAATCCCAG TGAGTTCAAG ATGTCGGTGG TGTTCAACGA CGGTACTGAG
GTGCCCGCGA ATCTCGTCGG CCGTGATCCC AAGACCGATC TCGCGGTGCT CAAGGTCGAC
AACGTCGACA ACCTTTCCGT CGCGCGGATG GGGGATTCCG AGAAGATCCG CGTGGGTGAG
GAGGTCATCG CCGCAGGCGC CCCGCTCGGG CTCAGAAGCA CCGTCACGCA CGGCATCGTC
AGCGCCCTGC ACCGGCCCGT GCCGTTGTCG GGTGACGGGT CGGACACCGA CACCGTCATC
GACGGCGTGC AAACCGACGC GTCGATCAAC CACGGCAACT CCGGCGGTCC GCTGATCAAC
ATGAACTCCG AGGTGATCGG CATCAACACG GCCGGCAAGT CGCTGTCGGA CAGTGCCAGC
GGCCTCGGCT TCGCGATCCC GGTCAACGAG GTCAAGCAGG TTGTCGAGAC GTTGATCAAG
AACGGCAAGA TCGCGCACCC GACGCTGGGC CTGACGGCGC GGTCGGTGAG CAACGACGTG
GCCAAGGGCG CACAGATCGC CGACATCTCG CCGAACAGCC CGGCCGAGCG GGCGGGGCTG
CTGGAGAACG ACGTCGTCAT CAAGGTCGGT GACCGTGAGG TTGCAGACGC CGACGAGTTC
ATCGTCGCGG TGCGGCAGCT CGCGATCGGT CAGCCGGCTC CCATCGAGGT CCTGCGTGAC
GGGCGCCCCG TGACCCTCAC GGTGACCCCC AACGGCGACG ACAGCACGTA G
|
|---|
| Protein sequence | MTNLDQTGRE RLEPRPVSRP PVDPAAQRAF GRPTGVNGSF LGADQHRDQG EYTPKDQAPD
PVLAEAFGRP YQGGDSLQRH PTDAGALDAE RDGDADELDD PWRNPGAAAA LGTPALAPAG
PTQAAAPLGK LGVRDVLFGG KVSYVALVVL GLVALVIGVA GGWVGRTTAE VVSAFTTSKV
TLETSDTGGA ESEGQFAKVA AAVADSVVTI EATSKTEGSQ GSGVVVDGRG YIVTNNHVIS
EAATNPSEFK MSVVFNDGTE VPANLVGRDP KTDLAVLKVD NVDNLSVARM GDSEKIRVGE
EVIAAGAPLG LRSTVTHGIV SALHRPVPLS GDGSDTDTVI DGVQTDASIN HGNSGGPLIN
MNSEVIGINT AGKSLSDSAS GLGFAIPVNE VKQVVETLIK NGKIAHPTLG LTARSVSNDV
AKGAQIADIS PNSPAERAGL LENDVVIKVG DREVADADEF IVAVRQLAIG QPAPIEVLRD
GRPVTLTVTP NGDDST
|
|---|
| |