| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_4321 |
|---|
| Symbol | |
|---|
| ID | 4644121 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 4631300 |
|---|
| End bp | 4631899 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639807789 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_955104 |
|---|
| Protein GI | 120405275 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.675467 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0583361 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTGAAC GCTGGACCAA AGAGCGCCGT ACCGAGCACA CCCGGCAGAT CCTGCTGGAC
GCCGCCGAGG AAGTGTTCGC CCGCAAGGGC TTGACCGGTG CCGCGCTCGA AGAGATCGCC
GAGGCGGCAG GGTTCACACG CGGTGCCATC TACTCCCAGT TCGGTGCGAA GGAAAAGCTG
TTCCTTGCGG TCGTGGACCG CCAGCGCCAG CGGTTTCTCG ACGGCTTCGC CGACGTGATG
ATGTCCTTCC ATCGCCTCAG CGACGTCGAT ATCGACGAGC TGGCCGAGCG GTGGCGCCAG
TTGAGCAGCG GGCCCGACCG GGCGGCCCTG GGCCACGAGC TGACGCTGTA TCTGCTGCGC
AACCCGGAGG CGCGGGAAAG CGTGGCCGGC CAGCGACGCG AGACGGTCCG CGCCCTGGGC
GAATTCATCA GCAAGAACGT CGCGCGGATC GGCGGCACCT TGACCATCGA GGCCGAGACA
CTGGCCCGGG TGGTCCTGGC CGCCAACGAC GGGATCACCC TCAACAGCCA CCTCGACGGC
GAGGACCTCT ACCGCCCCTA TCTGCAGCTG GTCATATCCA GCGTCCAGAC CCCGCCCTAG
|
|---|
| Protein sequence | MAERWTKERR TEHTRQILLD AAEEVFARKG LTGAALEEIA EAAGFTRGAI YSQFGAKEKL
FLAVVDRQRQ RFLDGFADVM MSFHRLSDVD IDELAERWRQ LSSGPDRAAL GHELTLYLLR
NPEARESVAG QRRETVRALG EFISKNVARI GGTLTIEAET LARVVLAAND GITLNSHLDG
EDLYRPYLQL VISSVQTPP
|
|---|
| |