Gene Mvan_4315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_4315 
Symbol 
ID4644115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4625780 
End bp4626712 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content66% 
IMG OID639807783 
ProductLysR family transcriptional regulator 
Protein accessionYP_955098 
Protein GI120405269 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.451981 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCG ACTTCACCAG GCTCAGGTAC TTCGTCGCCG TCGCAGACGA ACTGCACTTC 
AAGCGTGCGG CCGACAAGTT GATGATCACG CCGCCGCCGC TGAGCAAGCA GATCAAACTG
CTGGAGAAGG AGCTCGGCGG ACCGCTGTTC GAGCGCGGCT ACCACGACGT CCGGCTCACT
CCGCTCGGGC AGCGTTTGGT GGGTCCGGCA CGGGAGATCC TGAGGCAGGT CGAGGAATTC
AAGGCTGTGG CAACGCAGGC GGTGCGCGGG TTGGCGCCGG TCCGGGTGAG CGCGACCGCC
TATGCGCCGT CAGATCTGCT CGGTGAGCTC GAGGCCGCGA TCGCAAGCCT GCCGGTCCCG
ACTGAGTTCA GTGTGCCGGG GTCGGCCGCC GAGGTCACCG CCAAGCTCAT CGCCGGGCAG
GCCGAACTGG GTCTGATCCA TCTGCCCGCC AACGACAAAC GGCTCCGGTA CAAGGTTGTG
GCCAGCTACC AGGGCGGTAT CGCGGTCCGC TTCGACGACC CGTTGGCCGC CAAGGACCTG
GTGTCCATCG AGGAACTGCG CGACCGCGAG GTGGCCATCG ACGTCGCGCG ACCCAACCCG
GTGGTGCTGG CAGGTCTCAC GCGTGGCCTC AATCGCAAGG GCGTCCACCG CATCGTCCGG
ACCACCAACC AGCGTGGCGG GGAGGTCGAG ATGGCGACGC AGGTGTTCAA CCGACATCTG
GTCGCGGTGG TCAGCTATGC CCCCGACTCC TTCATCGGCA AGATCTTCTC GCCGCCGGAG
TTCAAGCTGA TTCCGTTGGA CGAAAGCACC TGGGCACCAG CCGAAATCGC GTTGGCGTGG
GTGCCGGAGC GGGTGCAGGC GCGGCTCACC GAGGTCGAGT TGATGGTCGA ACAGATCGCC
GACCGACTGG GGCCCGTGCA CCGGGGAGCC TGA
 
Protein sequence
MDIDFTRLRY FVAVADELHF KRAADKLMIT PPPLSKQIKL LEKELGGPLF ERGYHDVRLT 
PLGQRLVGPA REILRQVEEF KAVATQAVRG LAPVRVSATA YAPSDLLGEL EAAIASLPVP
TEFSVPGSAA EVTAKLIAGQ AELGLIHLPA NDKRLRYKVV ASYQGGIAVR FDDPLAAKDL
VSIEELRDRE VAIDVARPNP VVLAGLTRGL NRKGVHRIVR TTNQRGGEVE MATQVFNRHL
VAVVSYAPDS FIGKIFSPPE FKLIPLDEST WAPAEIALAW VPERVQARLT EVELMVEQIA
DRLGPVHRGA