| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_4290 |
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| Symbol | |
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| ID | 4648392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | - |
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| Start bp | 4596926 |
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| End bp | 4597603 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639807758 |
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| Product | rhomboid family protein |
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| Protein accession | YP_955073 |
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| Protein GI | 120405244 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.235195 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGGAA TCGGTGGACA CCCCGGTATC CCCGCGGAGC CGAAGAAGCG GCCCGCGTGG
ATGGTCGGCG GCCTCACCGT CCTGTCTTTC GTGGTCCTGC TCTGGGTCAT CGAGCTGTTC
GACTCGCTGA CCGGACATCG CCTGGACGGC AACGGGATCC GCCCTCTGGA GACCGACGGG
CTGGCCGGGA TCCTGTTCGC TCCGCTGCTG CACTCCAATT GGGAGCACCT GCTCGCCAAC
ACCGTTCCTG CACTGGTGCT CGGCTTCCTG ATGACGCTCG CGGGACTGTC GCGGTTCATC
TTCGCCACGG CCATCGTGTG GATCGTCGGG GGCGTGGGCA CGTGGCTGAT CGGCAACATC
GGTGCGCACT GCCCGTACGT TGGGGTGCGC TGCGAGACCA ACCACATCGG CGCCTCGGGC
CTGATCTTCG GATGGCTGGC GTTCCTGATC GTGTTCGGCT TCTTCACCCG CAAGGTATGG
GAGATCGTGG TCGGCGTCGT GGTGCTGTTC GTCTACGGCA GCGTCCTGCT CGGCGTGCTG
CCGGGCACCC CCGGTGTCTC CTGGCAGGGC CACCTCAGTG GCGCGGTGGC CGGCGTACTG
GCGGCCTATC TGCTGTCCGG GCCGGAACGC AAGGCGCGGG AACGCCGCAA GGCGACCAAC
CCCTACCTGA CGACATGA
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| Protein sequence | MTGIGGHPGI PAEPKKRPAW MVGGLTVLSF VVLLWVIELF DSLTGHRLDG NGIRPLETDG
LAGILFAPLL HSNWEHLLAN TVPALVLGFL MTLAGLSRFI FATAIVWIVG GVGTWLIGNI
GAHCPYVGVR CETNHIGASG LIFGWLAFLI VFGFFTRKVW EIVVGVVVLF VYGSVLLGVL
PGTPGVSWQG HLSGAVAGVL AAYLLSGPER KARERRKATN PYLTT
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