| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_4271 |
|---|
| Symbol | |
|---|
| ID | 4648321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 4581277 |
|---|
| End bp | 4582290 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639807738 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_955054 |
|---|
| Protein GI | 120405225 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.874043 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGAA CGAAGTTGGT GATCGGTGCC AGCGGCTTCC TGGGATCCCA CGTCACCAAG
CAGTTGATCG CCGCAGGCGA GGACGACGTC CGGGTCCTGA TCCGCACCAC CAGCTCGACG
CGCGGCATCG ACGGACTGCC GGTGCAAGTC CACTACGGCG ACATCTTCGA CACCGGCGCG
CTGCGGGCCG CGATGGCCGG CTGTGACGTC GTCTACTACT GCGTGGTCGA TGCACGTCCG
TGGCTGCGGG ATCCGGCACC GATGTGGCGG ACCAACGTCG ACGGGCTGCG CAATGTCCTC
GACGTCGCGG TCGGCGCCGG CCTGCACCGC TTCGTCTTCA CCAGCTCCAT CGGCACGATC
GGGCTGGCCG CGGACGGACT GGCCGACGAA GACACGGCGC ACAACTGGCT GGACAAGGGC
GGTGCCTATA TCCGGTCCCG GGTGGAGGCC GAACAGATGG TGCTCCGGTA CAGCGCGGAG
AAGGGGCTGC CCGCAGTCGC GATGTGCGTG GCCAACACCT ACGGACCGGG CGACTTCCTG
CCGACGCCGC ACGGCGGGAT GCTCGCCGCT GCGGTGGCGG GCAGGCTCCC GTTCTACATC
GACGGCTACG ACGCCGAGGT GGTCGGCATC GAGGATGCGG CGCGCGCGAT GATCCTCGCC
GCGGAGCGTG GCCGCACCGG CGAGCGTTAC ATCGTCAGCG AGCGGTTCAT GAGCACTCGG
GAGATACATG AAATCGGTTG TGCCGCAGTG GGAGTCGCGC CGCCGAAGTT CGGTGTCCCG
ATCCGGGTGA TGTCGGCGGC CGGGTATCTG AGCGAAGGAG TGGCCCGGCT TCGCGGCAAG
GACACCATGC TCACGCCGCT CAACATCCGC CTGATGCACA TCATGTCGCC GATGGACCAT
TCCAAGGCTG TTCGTGAACT CGACTGGCAC CCGCAACCCA CATCGGAGGC AATCGTGGCG
GCCGCGCACT TCTTCCGGGA CCGGCGTCAG CGTGCGGCAC AGGGGGCCCG ATGA
|
|---|
| Protein sequence | MAGTKLVIGA SGFLGSHVTK QLIAAGEDDV RVLIRTTSST RGIDGLPVQV HYGDIFDTGA
LRAAMAGCDV VYYCVVDARP WLRDPAPMWR TNVDGLRNVL DVAVGAGLHR FVFTSSIGTI
GLAADGLADE DTAHNWLDKG GAYIRSRVEA EQMVLRYSAE KGLPAVAMCV ANTYGPGDFL
PTPHGGMLAA AVAGRLPFYI DGYDAEVVGI EDAARAMILA AERGRTGERY IVSERFMSTR
EIHEIGCAAV GVAPPKFGVP IRVMSAAGYL SEGVARLRGK DTMLTPLNIR LMHIMSPMDH
SKAVRELDWH PQPTSEAIVA AAHFFRDRRQ RAAQGAR
|
|---|
| |