Gene Mvan_4248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_4248 
Symbol 
ID4648956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4557388 
End bp4559001 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content70% 
IMG OID639807715 
Productfumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 
Protein accessionYP_955031 
Protein GI120405202 
COG category[C] Energy production and conversion 
COG ID[COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.374366 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACT GGGACCATGA GGCCGACGTC GTCGTACTGG GTAGTGGGGG CGCGGGACTC 
ACCGCGGCGC TCACCGCCGC GGTGAACGGC GCCACGGTGG AGGTCTATGA AAAGGCCGAG
ACGGTCGGCG GAACAACCGC GGTGTCAGGC GGGATCGTGT GGATTCCTGC ACACCCCCGG
TCGGGCGACG GCGAGCTGAC CGCCGAGGAC GCGATGGCCT ACCTGCGCGC ACAGTCCCTG
GGTTACATGG ACGACGAACT GGTCGAGACG TTCGTGCAGA GCGGCGCACC GATGCTCGAT
TTCCTGGAAG CGCACAGCGA TCTCGTGTTC GAGGTCGCGG CCGGCTTCCC CGACTACAAA
CCGGAGCTGC CCGGCGGCAA ACCCGGCGGC GGGCGGTCGT TGCACGCCGG GCCGTTCGAC
CTGGCACGGC TCGGTGACTG GCGCGACCGG ATCACTTCCT TTCCCGCCGA CTTCAGCAAT
GTCGGGATCG ATGCGGAGAC CAGGGCGCGG ATCCACGCGG CGGTCGACAA CGAGTCCGGG
GACTACTGTG TCGCCGGCAC CGCGCTGATC GCGGGACTGC TGCGCAGCCT GCTGGACCGG
GGCATCACGC CGCACACCGA GGCGCGCGCC GTCGAGCTGA TCGCCGACCC GCTGGGCATC
ACCGGGGTGC GAATCGAGCA GGGCGACAGC GACTTCCGGG TGCGCGCACA CCGCGGCGTC
GTCCTGGGCA CCGGCGGATT CGAATGGGAC CAGCGGCTGG TGGAAGCGTA CCTGCGGGGC
CCGATGCGCG GCGCGGTATC ACCGCCGAAC AACACCGGCG ACGGACTGCG GATGGCGATG
GCGCACGGGG CGGACCTGGC CAACATGGGT GAAGCGTGGT GGGTCCCCAT CGTGCAGATC
CCCGGCGACA CCTTCGAGGG TCAGCCCCGC AGCCGCAGCG TCCGCCTGGA GCGCACCCGG
CCGCGCAGCA TCATCGTCAA CCGGGCAGGC AGGCGGTTCC TCAACGAGGC CGGCGAGTAC
AACTCGATGG CGGGGCCGTT CCACTTCCTG GATCCCAAGC TCGGCTATGC CAACGACCCG
GCCTGGATCG TGTTCGATTC GATCCACCTC AAGCACTACG GGTTCCTCGG GGTGGATCCC
GACGGGCCCG TCCCCGAATG GTTCTGCCAG TCCGCCGATC TCGAAGAACT CGGAGAGAAG
ACCGGCATCG ACCCCGTGGG GCTGGGCGCC ACCCTGGCCG CCTGGAACTC CAACGTCACG
CAGGAACACG ATCCCGACTT CGGCCGTGGC GCAAGCGCTT ACGACGGTTA CTGGGGTGAC
ACCACGGCGA CCACCACGGC GGGTCAGACG CTCGGCCCGA TTGACACCGC CCCGTACTTC
GCGGTGCCGG TGTCCATCGG CGCGATGGGC ACCAAGGGCG GTCCGCGCAC CGACCGCGAC
GGACGGGTGC TGCATGTCAG CGGCACCGCC ATCACCGGAC TGTTCGCCGC CGGCAACGCG
ATGGCCGGTG CCACCGGTAA GGCGTACGGC GGCGCGGGCG GCACCCTGGG CCCCGCCATG
GTGTTCGGTT ATCGCGCCGG CTACACCGCC GCGACCGGCA AGTCAGCCCC CTGA
 
Protein sequence
MTDWDHEADV VVLGSGGAGL TAALTAAVNG ATVEVYEKAE TVGGTTAVSG GIVWIPAHPR 
SGDGELTAED AMAYLRAQSL GYMDDELVET FVQSGAPMLD FLEAHSDLVF EVAAGFPDYK
PELPGGKPGG GRSLHAGPFD LARLGDWRDR ITSFPADFSN VGIDAETRAR IHAAVDNESG
DYCVAGTALI AGLLRSLLDR GITPHTEARA VELIADPLGI TGVRIEQGDS DFRVRAHRGV
VLGTGGFEWD QRLVEAYLRG PMRGAVSPPN NTGDGLRMAM AHGADLANMG EAWWVPIVQI
PGDTFEGQPR SRSVRLERTR PRSIIVNRAG RRFLNEAGEY NSMAGPFHFL DPKLGYANDP
AWIVFDSIHL KHYGFLGVDP DGPVPEWFCQ SADLEELGEK TGIDPVGLGA TLAAWNSNVT
QEHDPDFGRG ASAYDGYWGD TTATTTAGQT LGPIDTAPYF AVPVSIGAMG TKGGPRTDRD
GRVLHVSGTA ITGLFAAGNA MAGATGKAYG GAGGTLGPAM VFGYRAGYTA ATGKSAP