Gene Mvan_4212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_4212 
Symbol 
ID4645897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4519465 
End bp4519995 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content66% 
IMG OID639807679 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_954995 
Protein GI120405166 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0509659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGACTAG CCCCACTGCC CGCGGACCAG TGGGACGGCG TGGCCGAACA GGCCCTTTCC 
GGCCTGATGC CGGCCGAGCT CCGCAATCCC GAGACGGCCG GAAACCTGGT CGGCACGCTC
TTGCGCCACC CCAAGCTGGC CAGAGCGTTC CTCCGGTTCA ACTTCCAACT GCTGTACGGC
ACGACGTTGC CGGAGCGTCT TCGCGAGTTC GTGGTCCTGC GCGTCGCCCG CCTCTCGAAC
TGCGAGTACG AATGGCGTCA TCACGTCGCC ATGGGCCGCG ACGCGGGCCT GTCCGACGAC
GTGATCGCAG GCATCGAACG CGGCGAGGCC GTCGATGAAT TCGACCGCGC AGTACTGACG
GCGGTCGACG AGCTGCACCA CGACTCGGTG ATCTCCGACT CCACCTGGAC GGCCCTGTCG
TCCCACCTCG ACGAGCGTCA GCTGATGGAC CTCGTCTTCA CAATCGGCTG CTATGGCGCA
CTTGCCATGG CGATCAACAC CTTTGGCGTA GAACCCGACC AGGAGAGGTA A
 
Protein sequence
MRLAPLPADQ WDGVAEQALS GLMPAELRNP ETAGNLVGTL LRHPKLARAF LRFNFQLLYG 
TTLPERLREF VVLRVARLSN CEYEWRHHVA MGRDAGLSDD VIAGIERGEA VDEFDRAVLT
AVDELHHDSV ISDSTWTALS SHLDERQLMD LVFTIGCYGA LAMAINTFGV EPDQER