Gene Mvan_4162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_4162 
Symbol 
ID4648190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4472872 
End bp4474059 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content66% 
IMG OID639807629 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_954945 
Protein GI120405116 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.134416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTGA CTTTCGAACC CGATGTGGAG GAGTTCCGCG CCGAGTTCTC CGCCTTCCTC 
GACGAGCACA CGCCCTCTGC GGCAGAGACT TTGGAGCGTC CGCGCTCGGT GTCGCACATG
CCGCAGTGGG CCAGGGAATG GCAGCGGCTG TTGTTCGACA ACGGCTGGCT GCTTCCCGCG
CAGCCGCCCG AGTTCGGGGG CCGCAACGCG TCGGTGCTGC AGACGTTCGT GCACGCCGAG
GAACTGTGCC GGCGCCGGAT CTACCACAGC TTCAACCCGC AGGGCGTCAA CATCATCGCG
GCCTCGCTGC TGACGTTCGG CACCGACGAA CAGAAGCATC AGTGGGCGGT TCCGGTGCTG
CGAGGAGAGC GCACCGCGTC GTTGGGCATG AGCGAGCCGA GCGCCGGCTC GGACCTCGCG
TCGTTGCGTA CCAAGGCGGT GCTCGTCTCG GAAAGCGGCG GGTCCTACTT CGTGGTCAAC
GGTCAGAAGG TGTGGACCTC GGGCGCCCAC GATGCCGACT TCCTGTTGAC GTTCGTGCGC
ACCGACCCGG ATGCGCCCAA GCACAAGGGA ATCAGCGTGC TGCTGATCCC GACCGACCTC
GAGGGTGTGG TGTGCCGGCC GTTCGCCGAT ATGACCGGGA TCGACAACCT GGACTTCAAC
GAGGTGTTCT TCACCGACGT GCGCGTCCCC GTCGAGAATC TCGTCGGCCC GCTCAACGGA
GGATGGGGCG TCGCCAACGG CTCACTGGGA CATGAGCGGA CGATGATGTG GCTCGGCTTC
GCCGACCGGA TCGCCAACTG CATCGCCGAT TTCAAGCCGA AGAACCCGCT GGAGCGCGAC
GCGCTGGCCA CCAGCATCAT GGACTACCAG GCGCTGCGCC TGCTCGGTTC GGTCGGCATC
GCGAAGGCGG CACGCGGCGA GGTCGACGTG GCATCGGTGT CCATCCCGAA GCTGCTCGGC
GCGGAGGCCG AGCAGCGGAT CGAGGGCCTG GCACTGGAGG CAGCCGGTCC TGACGGGCTG
GTGCACCCGG CGACCTCAGG ACCGTATGAG CACATGAACC TCGACCACTA TTTCGCCAGC
TGGTTCGAGC GCTACTGCCG CAGCTTCGGC GGCACCATCG CAGGCGGAAC CTCGGAGATC
CAGCGCAACA TCATCGCCCA GCAGGTGCTG GGATTGCCGC GGCGGTAG
 
Protein sequence
MQLTFEPDVE EFRAEFSAFL DEHTPSAAET LERPRSVSHM PQWAREWQRL LFDNGWLLPA 
QPPEFGGRNA SVLQTFVHAE ELCRRRIYHS FNPQGVNIIA ASLLTFGTDE QKHQWAVPVL
RGERTASLGM SEPSAGSDLA SLRTKAVLVS ESGGSYFVVN GQKVWTSGAH DADFLLTFVR
TDPDAPKHKG ISVLLIPTDL EGVVCRPFAD MTGIDNLDFN EVFFTDVRVP VENLVGPLNG
GWGVANGSLG HERTMMWLGF ADRIANCIAD FKPKNPLERD ALATSIMDYQ ALRLLGSVGI
AKAARGEVDV ASVSIPKLLG AEAEQRIEGL ALEAAGPDGL VHPATSGPYE HMNLDHYFAS
WFERYCRSFG GTIAGGTSEI QRNIIAQQVL GLPRR