| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_4154 |
|---|
| Symbol | |
|---|
| ID | 4648913 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 4464821 |
|---|
| End bp | 4466014 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639807621 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_954937 |
|---|
| Protein GI | 120405108 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.880245 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTACG TCGCGTCCGT CGGCACCTAC CTGCCGTGCT GGGGTACGTC CCTGCACAGG
GTGGCCGGCG ATGACGAGGA TGCCGTCACG ATGGCCGTCG AGGCCGGCCG GGCGGCGTTG
ACGGCGGGCG GGGCAGTGGA GCGCGTGGTG CTGGTCAGCC GGGATCTGCC GCTGTTGGAA
AGCAGCAACG CGGCAGTGCT TCTGGCCGGA CTCGGGCTGG ACCCCGAACT GGAGGTCGAC
GAACGCCTGG GTGGGGCACC GGCCACCGTC GACGCCGTCA GCTCGGCGCG GCCGCGCACC
CTGATCATCG GCGCCGACCT CGCGCCTGCC GGTGCGGCCG CCATCCTGAC GGCCGAGAAC
GGGCTTCAGG TGCGGACCGC CGCCCGGGTC GCGCGCAGCC TGCCGGTGCG GACCCGCAAG
GCCACCGGCG ACGTACACGA TTACGGCGAT CCCCGGCTGC TGCACGAACG CGGCCTGATC
GCCTCGCTGG CCGCCGCCTG GCTGGACACC CCGGTGGCGG TGGCCGGGGT CGACCGTCAG
CGAGCGGTCG AACTCTGCCT GCCAGATCCG CCCGCCGTAC CCACCTCAGG CGCGAGTGCC
AGCCTGTTCG CGCTGGCCGC CATGGCTGAG CAGGGCAGGA CCGGACCGCT GGTCGCCGTC
GAGCAGGCGA TCCTGTCCGG CATCAGCGTC AGTGGCGGCA GCGCGCAGAT CTGCCGCCGA
GAGCCACCTT CGCGTGCGCT GCCGGACGGT ACCTTCATCG CGGACGCGGA GATCCCCATC
TCACTGGCCG CCTACGAGCG GGCCTTCGAG GCCAAGGTGC GTTGGGAGGC GGGCCGATTC
GACGAGTCGG GCGAACTCGA CTTCCCGCCG CGCTACCGCG TCGGCGATGA CGGCGCGCTG
GCCACCGACT ATGAACTTGT CCCGCTGCCG CGGACCGGAA CCGTCTACAC CGAGACGACG
GTGCACATTC CGGTCCCGGG CCTGCGGACC CCCTACACGC TGGTGATCGT CGAGCTCGAC
GGTGTCGCCG TGCGGGCGTT GGTCAAGGTG ACCGGGGCGC AGCCGGGAAC AGTCGACATC
GGCCATCGCG GCCGGCTGGT GCTGCGTCGC GTCGCGGTCC GGTCCGGGGT GCCGGACTAC
GGCTATGCGT TCGAACCCGA CCCGGTGCCG TCCGGAGTCA GGGGGGCGGC GTGA
|
|---|
| Protein sequence | MPYVASVGTY LPCWGTSLHR VAGDDEDAVT MAVEAGRAAL TAGGAVERVV LVSRDLPLLE
SSNAAVLLAG LGLDPELEVD ERLGGAPATV DAVSSARPRT LIIGADLAPA GAAAILTAEN
GLQVRTAARV ARSLPVRTRK ATGDVHDYGD PRLLHERGLI ASLAAAWLDT PVAVAGVDRQ
RAVELCLPDP PAVPTSGASA SLFALAAMAE QGRTGPLVAV EQAILSGISV SGGSAQICRR
EPPSRALPDG TFIADAEIPI SLAAYERAFE AKVRWEAGRF DESGELDFPP RYRVGDDGAL
ATDYELVPLP RTGTVYTETT VHIPVPGLRT PYTLVIVELD GVAVRALVKV TGAQPGTVDI
GHRGRLVLRR VAVRSGVPDY GYAFEPDPVP SGVRGAA
|
|---|
| |