Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_4146 |
Symbol | |
ID | 4648905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 4455740 |
End bp | 4457077 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639807613 |
Product | virulence factor Mce family protein |
Protein accession | YP_954929 |
Protein GI | 120405100 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGCG GTGTGAAGCA GTTGACGGTG CTCGGTTGCA GTGCCGCGCT GTCACTTTCG GGGTGCGCGT TCCAGGGCGT GAACTCACTG CCTCTGCCAG GTGCGGTGGG ACGCGGCCCG GACGCGGTCT CCTATAACGT CCAGGTGCCC AATGTCGCGA CGCTGGAGTC GAATTCGCCG GTCATGATCG ATGACGTGGT CGTCGGCAGC GTCGGCAAGA TGACCGTGCA GAACTGGCAT GCCGACGTCG AGATCTCGGT CAAGCCCGAC GTGGTGATCC CCGCGAACGC TGTGGCGACA GTGGGGCAGA CCAGCCTGTT GGGGTCGATG CACCTCGCAT TGAACCCGCC GTTGGGAGAC GAACCGAAAG GACGGCTCCA GCCGGGATCC ACGCTCCCGC TGAACGCATC GTCCACCTAT CCCACCACCG AGCAGACCCT GGCGTCGCTG TCCACCGTCG CCAACGGCGG AGGGCTCGGT CAGATCGGCG ACATCGTCCA CAACATGAAC ACGGCCCTGT CGGGGCGTGA GCCCGAGGTT CGCGAACTGC TCACCAGGCT CGACAACTTC GTCGGGGTCC TTGCGGAGCA GCGCGAGAAC ATCATTGCGT CCATCCAACA GTTGCGCCGC GTCGCCGGGA CGTTCGCCAA CCAGCGCGAG GTGATCGATC GTGCGCTCAA GGAGATTCCG CCCGCCATCG ACGTCCTGAT CAGAGAGCGG CCGAACTTCA CCACCGCGCT GGATCGACTC GGCCAGTTCA GCAACACCGC CACGCAGCTT GTCAACGACG CAGGCGACGA CCTGGTCAAG AACCTGGAGA ATCTGGGTCC GGTTCTCGGT GCGCTCGCCG ACATCGGACC GGATCTCAAT GAAGCGGTGC TCTGGGCGAG TGCGTTCCCG TACGGGCCGA CGTTCGCCGA CCGCATCACC CGCGGCGACT ACATCAACCT GTACGCGATC TTCGACCTCA CCTACCCGCG GTTGAAGAAG ACGCTCCTTG CCGGGACGCG GTGGGGCGAC CAGAACGCCA AACTGATTCC CGCACCGGGA GATCCGTACT ATCTGAACTA CGCCTACAAC CCGATGATGG TCGGCATCAC GCCTCCACCG GAGGAGGCTC TGCCGCCACC GGCACAGGGT GGTGCGCCGT CGTCACTGAC CGGTGTGCCC GCCCAGCCGA TTCTGCCCGT GGTACCGCCG CCTCCGGCCG CGCCGTGGTT GCCGCAGGCA CAACCGATGG CAGGTGACCA GATCTTCGCG GGCCCGTTCG GAGCGCCGAC TCCGCCGCCG GTGGCTCCAC CGGCACCTTC CGTGCCGACA CCTGGAGGAG GTGGCTGA
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Protein sequence | MIRGVKQLTV LGCSAALSLS GCAFQGVNSL PLPGAVGRGP DAVSYNVQVP NVATLESNSP VMIDDVVVGS VGKMTVQNWH ADVEISVKPD VVIPANAVAT VGQTSLLGSM HLALNPPLGD EPKGRLQPGS TLPLNASSTY PTTEQTLASL STVANGGGLG QIGDIVHNMN TALSGREPEV RELLTRLDNF VGVLAEQREN IIASIQQLRR VAGTFANQRE VIDRALKEIP PAIDVLIRER PNFTTALDRL GQFSNTATQL VNDAGDDLVK NLENLGPVLG ALADIGPDLN EAVLWASAFP YGPTFADRIT RGDYINLYAI FDLTYPRLKK TLLAGTRWGD QNAKLIPAPG DPYYLNYAYN PMMVGITPPP EEALPPPAQG GAPSSLTGVP AQPILPVVPP PPAAPWLPQA QPMAGDQIFA GPFGAPTPPP VAPPAPSVPT PGGGG
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