Gene Mvan_4130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_4130 
Symbol 
ID4648889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4440590 
End bp4441249 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content72% 
IMG OID639807597 
Product4-diphosphocytidyl-2C-methyl-D-erythritol synthase 
Protein accessionYP_954913 
Protein GI120405084 
COG category[I] Lipid transport and metabolism 
COG ID[COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase 
TIGRFAM ID[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.494087 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGTGA CGGCGATCCT GCCCGTGCCC GAAAGCTACG TCCAGCGCCG CGAAGCGGTG 
TTCGCCCCGG TGGCCGGCGA GTCGCCGCTC GTGCGGATCG TGCGGGCGCT GGCCGCCGTC
GGTGACGTCG TGGTGGCCGC GGCGCAGTCG CTGGCCGATG AAGTCCGCGA AACCCTGGCG
GCACAAGCAC TCCCGGCGGT CCGCACAGTG GGCGCCCGGT CACCGGGTGC GCGGGCGGAC
TGCATCGCCG CCGGGTTGGC CGCACTGGGC GACGGTGACG GTCCTGTGCT GCTGCACGAC
CTGACCTGGC CGCTCATCGC GGACGCGACG CTCGATGCCG TGCTGTCGGC GGTGCACGGC
GGCGCGGACG CGGTGCTGCC GATCCGGCCC GTCACCGACA GTGTCAAAGC GGTGGACGCA
CGCGGCGCGG TGACGGCGAC GCTGGACCGC TCGCCGCTGC GCACCGTGCA GTTCCCACGC
GGGTTCGACG CCGCAGTGTT GGAGCGACTC CTTGCCGACG GTGCCGCAGA CTTCGACGAA
CTCGGTGCCG CACTGTCGGT CGGAACACCA CTGACCCTCG TGGAGGGTGA CACCGACACC
ATGAGCTTCG ATCTGCCCGC GGATTCCGCG TTTCTGGCCG CGGTCATCGC AGGGCGGTAG
 
Protein sequence
MTVTAILPVP ESYVQRREAV FAPVAGESPL VRIVRALAAV GDVVVAAAQS LADEVRETLA 
AQALPAVRTV GARSPGARAD CIAAGLAALG DGDGPVLLHD LTWPLIADAT LDAVLSAVHG
GADAVLPIRP VTDSVKAVDA RGAVTATLDR SPLRTVQFPR GFDAAVLERL LADGAADFDE
LGAALSVGTP LTLVEGDTDT MSFDLPADSA FLAAVIAGR