Gene Mvan_4117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_4117 
Symbol 
ID4648876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4419006 
End bp4419725 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content69% 
IMG OID639807584 
Producthypothetical protein 
Protein accessionYP_954900 
Protein GI120405071 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.324541 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGCTTA GTTTTCTCGC CTTGTCGGCA GGCCTGTTGG TCCTCGGCGC CGCCGGCGGC 
CCGGTGGCGT CGGCGGAGCC CGCCGGCGAG CCGGTCCTGG CCGAGGCCGC GGCCGCGGAA
GCGCCTCCGG CGCCGGAGGG CGCCGTAGTG TCCCCGCCGC CGTCGACGAC TTCCGGTCCC
GACGGGTGGA CGCTCACCGT GGGCGCCAAA GACGAGACTC AGCGCCCCAT TCCGCCCCTG
ACGACCGCGC TGTCGACCCG CGAGTACGAG GTCGGTGGGA CGTTCACCGC GGCGATGACG
CACCCCGAGG AGGACGAGGC GTCGCGCGGG GAACTGGAGG TCGGGTATCA GATCGGCTGC
GGAATCGACA TGAGCACCTC CAACGGGGTG TCCCTGACGG GAACCGCCGG CATCACCCCG
TCAATCGGCA TCCTCGGTAC CGACGTCATC TCACCGTTCC CCGAAGGCGT GTTGCCCGGT
GTCGCCGGCA ACCTCGGTGG CGGCATCACG ATCGGCCTCA AACCGGGAAT CATCAACGTC
GTAACGGTCA CCCAGAAGGA GTTCACCGGC GCCGAACCCT GGGTCATGGT GAAGGGCTTC
CGCATCAAGA TCGACGGGTG CGTCGGCGAG TCGTTCATCC GCTCGTACGC GGTGTTGACC
CGCTCGACGG ATGTCTCCGA CGCCGTGCTG GCGTACTACG GCGAGACGAA GAAGGTGTAG
 
Protein sequence
MRLSFLALSA GLLVLGAAGG PVASAEPAGE PVLAEAAAAE APPAPEGAVV SPPPSTTSGP 
DGWTLTVGAK DETQRPIPPL TTALSTREYE VGGTFTAAMT HPEEDEASRG ELEVGYQIGC
GIDMSTSNGV SLTGTAGITP SIGILGTDVI SPFPEGVLPG VAGNLGGGIT IGLKPGIINV
VTVTQKEFTG AEPWVMVKGF RIKIDGCVGE SFIRSYAVLT RSTDVSDAVL AYYGETKKV