| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_4108 |
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| Symbol | |
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| ID | 4648867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 4406247 |
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| End bp | 4407878 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639807575 |
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| Product | putative glutamate synthase (NADPH) small subunit |
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| Protein accession | YP_954891 |
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| Protein GI | 120405062 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases
[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00112813 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.10156 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGGTT TCGACGACGT CACGCCGCTC GCGAACCTTG CCGAGGGGCA CTCCCGGGCC
GGCCCGGTGC GCGACCGCAG ACCGGTGTAC GTCGATCTGT TACCGCCCTG CAATGCCGGT
TGCCCGGCCG GCGAGAACAT CCAGGCCTGG CTGGCGCACA CCACCGCCGG ACGGCACGAA
GCCGCCTGGC GGCAGCTGAC GGCGGACAAT CCCTTTCCCG CGATCCATGG CCGAGTGTGC
TATCACCCCT GCGAAACTGT CTGCAACCGA GGTCGTCTCG ACGCCGCGGT GTCGATCCAT
GCCGTCGAGC GGTTCCTCGG TGACCTTGCC CGCGAGCGCG GTTGGATGTT CGAACCGCCG
TCGACCCGCA CCGGAAAGCG GGTCCTTGTC GTCGGCGCGG GGCCCAGTGG CCTGTCTGCT
GCCTACCACT TGGCGCGCCT CGGCCACCAC GTCGAAGTCC GGGACGCGGG CGCCGGGCCG
GGCGGGATGA TGCGCTATGG CATTCCGAAC TACCGGTTGC CGCGCAACGT GCTGGATGAC
GAATTGAACC GGATCGCCGC CATGGGCGTG CAGTTGACCT GTGACCACCG GGTCGACGAT
CTCGCCGCCG AACGGGACGA GGGGGGATTC GATGCCGTCT TCGTCGCCGT CGGCGCGCAC
CTGGCGAAGC GCGTCGACAT CCCGGTGCGT GACGCGGCTC CGATGATGGA CGCGGTGTCG
TTCCTGCGCA GCGTGGCCTC CGGCGACGCT CCGGCGATCG GCCGTCGGGT CGCCGTCTAC
GGTGGCGGCA ACACCGCGAT GGACGCTGCG CGCGTCGCCC GCCGGCTCGG CGCCGAGGAC
ACGGTGATCC TCTACCGTCG TACCCGCGAT CAAATGCCCG CCCACGCCGA AGAAGCCGAG
GACGCCGAAC GCGAGGGCGT TCGGATCAAC TGGCTACGAA CCATCACCGC CTTCGACGGT
CCCGATATCC AGGTCGAGGT CATGGAACTC GACGATTCGG GCCGGCCACA GCCGACCGGA
CGTTTCGAGA CGCTGCCCGC CGACACCCTG ATCATGGCGA TCGGCCAGCA GACGGAGTCG
GCTTTCATGC GGACGCTGCC CGGAGTGGAG TTCGACGCCG ACGGCAGCGT GCTCGTCTCG
GCGTCACTGA TGACCGGCTG TCCGGGCGTA TTCGCCGGTG GCGACATGGT GCCCAGTGAG
CGCACGGTGA CTGTGGGGGT GGGCCACGGG AAGAAGGCGG CCCGACACAT CGACGCCTGG
CTGCGCGGGG CGTCGGCCGG GCGCCCGCCC AAACATCCGA CGGCCACGTT CGACGCGCTG
CACCTCTGGT ACTTCGGGGA CACCGCGCAA CGCAGGCAAC CTGAACTGGA GGCCACCACA
CGTGTGCAGG GTTTCGACGA GGTCGTCGGC GGTCTGTCCA CCGACGAGGC GGTGTACGAG
TCGGGGCGCT GCCTGTCGTG TGGCAACTGC TTCGAATGCG ACGGCTGCCT CGGCGCCTGC
CCCGAGGATG CGGTGATCAA ACTTGGTGTG GGCCAACGGT ATCGGTTCGA TTACGACAAG
TGCACCGGCT GCGCGGTCTG CGCCGATCAA TGCCCGGTAC ACGCCATCGA GATGTTCGGG
GAGCCGACCT GA
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| Protein sequence | MPGFDDVTPL ANLAEGHSRA GPVRDRRPVY VDLLPPCNAG CPAGENIQAW LAHTTAGRHE
AAWRQLTADN PFPAIHGRVC YHPCETVCNR GRLDAAVSIH AVERFLGDLA RERGWMFEPP
STRTGKRVLV VGAGPSGLSA AYHLARLGHH VEVRDAGAGP GGMMRYGIPN YRLPRNVLDD
ELNRIAAMGV QLTCDHRVDD LAAERDEGGF DAVFVAVGAH LAKRVDIPVR DAAPMMDAVS
FLRSVASGDA PAIGRRVAVY GGGNTAMDAA RVARRLGAED TVILYRRTRD QMPAHAEEAE
DAEREGVRIN WLRTITAFDG PDIQVEVMEL DDSGRPQPTG RFETLPADTL IMAIGQQTES
AFMRTLPGVE FDADGSVLVS ASLMTGCPGV FAGGDMVPSE RTVTVGVGHG KKAARHIDAW
LRGASAGRPP KHPTATFDAL HLWYFGDTAQ RRQPELEATT RVQGFDEVVG GLSTDEAVYE
SGRCLSCGNC FECDGCLGAC PEDAVIKLGV GQRYRFDYDK CTGCAVCADQ CPVHAIEMFG
EPT
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