| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_4089 |
|---|
| Symbol | |
|---|
| ID | 4648697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 4380686 |
|---|
| End bp | 4381846 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639807554 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_954872 |
|---|
| Protein GI | 120405043 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0445399 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATA ATCTGGCCAC GGGCATCCTG CCCGACCACT ACGAGCAGCT GGCCAAGACC
GTGCGGGACT TCGCGCAGAG CGTCGTGGCG CCGGTCGCGG CCAAACACGA CGAGGAGCAC
TCGTTCCCGT ACGAGGTGGT GGCCGGAATG GCCGACATGG GCCTGTTCGG CCTGCCGTTC
CCCGAGGAGT ACGGCGGTAT GGGCGGCGAC TACTTCGCGC TGTGCCTGGC ACTCGAAGAA
CTGGGCAAGG TCGACCAGAG CGTGGCGATC ACGCTGGAAG CCGGTGTGTC GCTGGGCGCG
ATGCCCGTCT ACCGGTTCGG CACCGAAGCC CAGAAGCAGG AGTGGCTGCC GCTGCTGGCC
AGCGGAAAAG CCCTCGGCGC CTTCGGCCTG ACCGAAGCGG GCGGTGGCAG CGACGCCGGC
GCGACCAAGA CGACCGCCCG GCTCGACGAC GGGCACTGGG TTATCAATGG CTCCAAGCAG
TTCATCACCA ACTCCGGCAC CGACATCACC AAGCTGGTCA CCGTCACCGC GGTCACCGGG
GAAACTGACG GCAAGAAGGA GATCTCGTCG ATCCTGGTGC CGGTGCCCAC GCCGGGCTTT
ACCGCTGAGC CGGCCTACAA CAAGGTGGGC TGGAACGCGT CGGACACGCA CCCGCTCAGC
TTCGACGACG TCCGCGTGCC GCAGGAGAAC CTGCTCGGAG AGCGGGGTCG CGGCTACGCG
GGCTTCCTGC GGATCCTCGA CGAGGGCCGC ATCGCGATCG CCGCGCTGTC GGTGGGCGCC
GCGCAGGGAT GCGTGGACGA AAGCGTGAAG TACGCCAAGG AGCGGCACGC GTTCGGGCGT
GCGATCGGCA CCAATCAGGC GATCGCGTTC AAGATCGCGC GGATGGAGGC CAGGGCGCAT
GCCGCGCGGG CGGCGTACTA CGACGCGGCC GCGCTGATGC TGGCGGGCAA GCCGTTCAAG
AAGGCCGCTG CGGTGGCCAA GCTGGTCTCC AGCGAGGCCG CGATGGACAA CGCCCGCGAC
GCCACCCAGA TCTTCGGCGG CTACGGCTTC ATGAACGAGT ATCCGGTGGC CCGGCACTAC
CGCGACAGCA AGATCCTCGA AATCGGCGAG GGGACAACCG AAGTGCAGCT GATGTTGATC
GGGCGGGAGC TCGGCCTGTA A
|
|---|
| Protein sequence | MSNNLATGIL PDHYEQLAKT VRDFAQSVVA PVAAKHDEEH SFPYEVVAGM ADMGLFGLPF
PEEYGGMGGD YFALCLALEE LGKVDQSVAI TLEAGVSLGA MPVYRFGTEA QKQEWLPLLA
SGKALGAFGL TEAGGGSDAG ATKTTARLDD GHWVINGSKQ FITNSGTDIT KLVTVTAVTG
ETDGKKEISS ILVPVPTPGF TAEPAYNKVG WNASDTHPLS FDDVRVPQEN LLGERGRGYA
GFLRILDEGR IAIAALSVGA AQGCVDESVK YAKERHAFGR AIGTNQAIAF KIARMEARAH
AARAAYYDAA ALMLAGKPFK KAAAVAKLVS SEAAMDNARD ATQIFGGYGF MNEYPVARHY
RDSKILEIGE GTTEVQLMLI GRELGL
|
|---|
| |