Gene Mvan_4084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_4084 
Symbol 
ID4649296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4375933 
End bp4377135 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content71% 
IMG OID639807549 
Productbranched-chain alpha-keto acid dehydrogenase subunit E2 
Protein accessionYP_954867 
Protein GI120405038 
COG category[C] Energy production and conversion 
COG ID[COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.247511 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG TGCGTGAGTT CCTGGTCCCC GATCTCGGTG AGGGGCTCGA AGAGGCGACG 
GTCACCGCCT GGCAGGTCGC CATCGGCGAC GTCGTCACCC TCAACCAGAC ACTGTGCACC
GTCGAGACCA ACAAGGCGGA AGTCGAGATC CCGAGTCCGT TCGCCGGGCG GATCGCCGAA
CTCGGTGGCG CAGCAGGTCA GACGCTGCCC GTCGGCTCGG TGCTGGTGCG CATCGACCTG
GGCAATGACA CCGAGAACGA CAGGGCCGGC GACACGGACA GCGACGGGGA CAGCGCGACT
GACGCCGAGA AGGACGCGCC GCGCAGGCCG GTGCTGGTCG GGTACGGCGC GGACCACACC
ATGGACGGCA GCCGGCGGCG CGCCCGCGCC AAACCACGGG TGCGCAAACT GGCCGCCGAC
CTCGACGTGG ACCTGTCACG GATCGACGGC TCGGGCCCGG ACGGCATCGT GACCCGCGAC
GACGTCCTTG CCGTGACCGA CGGCGGAACC TCGCAGGACA GCGTCGTCAG CGGTGTGCGG
CTGGCGATGG CTCGGCGAAT GTCCCTTTCC CGCAGTGAGA TTCCGGATGC GCACGCGTCG
GTCGAGGTCG ACGGCAGTGA ACTGCTCAGG CTGCGGGACC GCCTCGCGGC GGCAGGTGCG
GATGGGGTCA CGCCCTTTGT GCTCGTGCTG CGGCTGCTGG TCGTCGCGCT GCGCAGGCAC
CCGGTGCTCA ACGCCACCTG GGTGGACACC GTGGACGGGC CACGCGTGCA CGTGCACCCG
GCGGTCCATC TCGGCGTCGG TGTCGCCGCG CCCCGCGGGC TGCTGGTGCC GGTGGTGACC
GACGCCCAGG AGCGAAGCAC CCGCCGGCTC GCCGACGAGG TGGCGCGGCT GGTCGCCGCC
GCCCGCGCCG GCACGCTGAA ACCCGGTGAG CTGCAGGGGT CGACGTTCAC GGTGTCGAAC
TACGGCGCGC TCGGTCTCGA CGACGGAGTG CCCGTCATCA ACCACCCCGA GGCCGCGATC
GTGGGCGTGG GTTCGTTGAA GCCGCGCGCG GTGGTTGTCG GCGGCGCGGT GGTGGCGCGG
CCGACGATGA GGCTCACCTG CGCGTTCGAC CACCGTGTCG CCGACGGTGC CCAGGTGGCC
GCGTTCCTCG CGGAGCTGCG GTCGCTGATC GAGTTGCCGG AGTTGGCGCT GCTGGATCTG
TGA
 
Protein sequence
MSTVREFLVP DLGEGLEEAT VTAWQVAIGD VVTLNQTLCT VETNKAEVEI PSPFAGRIAE 
LGGAAGQTLP VGSVLVRIDL GNDTENDRAG DTDSDGDSAT DAEKDAPRRP VLVGYGADHT
MDGSRRRARA KPRVRKLAAD LDVDLSRIDG SGPDGIVTRD DVLAVTDGGT SQDSVVSGVR
LAMARRMSLS RSEIPDAHAS VEVDGSELLR LRDRLAAAGA DGVTPFVLVL RLLVVALRRH
PVLNATWVDT VDGPRVHVHP AVHLGVGVAA PRGLLVPVVT DAQERSTRRL ADEVARLVAA
ARAGTLKPGE LQGSTFTVSN YGALGLDDGV PVINHPEAAI VGVGSLKPRA VVVGGAVVAR
PTMRLTCAFD HRVADGAQVA AFLAELRSLI ELPELALLDL